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Information for unigene UN43404
| FASTA Sequence |
| Unigene ID: UN43404 | Length: 675 |
SSR | | GGAACTCGAGAAAGATAATATCAGGACAAAATCTCATACAACACCCTAAGTAATAATAAAGTGTGATAGGTCGGTTCAAAAACATG
CGAAGAGTACAACACAACTAGTGATGATGATGATGATGATTCTCTCAGTACTTAACTAGTGCAAGAATTTGGAGCTGTGCACCGAG
CTTCTCTTCGGCAACCTTCTCAGCCTTGGCTCTAAGTTTGTTAAGTTGCTTCTTTCTCTCGTAGACCACTTGAGATCTCTCCTTCC
TCTTCGTCTCCAGCTCTTTGATGGTGTCATAGTGGTTCCACCCGACTTCAGAAGAAAGGCGACCCAACAAGCAGTACTTGTGACCA
GCTTGAAGCCTCAACACCTTGAGAGCATCGGGGATAACCATCCTCTTGACCTTGTCATATGGTGGAGGCACACCTTCGAAAACCTT
CATCCGGGCAAGTGCCGCAGCTCCACGCTTCGTTTTGTGTGGAATCATACAGCGAACAGTGCGCCAGAAGATTTTGGAAGGAGCAC
GGAAGTGAATGGGCCCGTGGGAAGGTTTGGTGTTCATACGCTTGCGGAGGAACCTCATGTACTTCATTTTCTGGCGGACGAGTCCA
CCGGAGAGGCAAATCTCCTCGCACCGCACCATTTTTGTTGAGCTTTCCTGTCTGTGTGTAAAGCAAGCAGCAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002863167 predicted protein [Arabidopsis lyrata subsp. lyrata] | 827 | 1e-086 |
| XP_002865669 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 823 | 4e-086 |
| XP_002883564 60S ribosomal protein L13A [Arabidopsis lyrata subsp. lyrata] | 823 | 4e-086 |
| NP_193053 60S ribosomal protein L13a-3 [Arabidopsis thaliana] | 820 | 1e-085 |
| NP_189127 60S ribosomal protein L13a-2 [Arabidopsis thaliana] | 819 | 1e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SVR0 60S ribosomal protein L13a-3 | 820 | 5e-087 |
| Q9LRX8 60S ribosomal protein L13a-2 | 819 | 6e-087 |
| Q9FKC0 60S ribosomal protein L13a-4 | 815 | 2e-086 |
| Q9SFU1 60S ribosomal protein L13a-1 | 802 | 6e-085 |
| O49885 60S ribosomal protein L13a | 735 | 3e-077 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RWI8 60S ribosomal protein L13a, putative | 782 | 2e-081 |
| B9S526 60S ribosomal protein L13a, putative | 781 | 2e-081 |
| Q3HRW1 60S ribosomal protein L13a-like protein | 776 | 8e-081 |
| A9PHS9 Predicted protein | 772 | 2e-080 |
| C6SYZ8 Putative uncharacterized protein | 772 | 2e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G13170.1 60S ribosomal protein L13A (RPL13aC) | 821 | 3e-088 |
| AT3G24830.1 60S ribosomal protein L13A (RPL13aB) | 820 | 4e-088 |
| AT5G48760.1 60S ribosomal protein L13A (RPL13aD) | 816 | 1e-087 |
| AT5G48760.2 60S ribosomal protein L13A (RPL13aD) | 816 | 1e-087 |
| AT3G07110.1 60S ribosomal protein L13A (RPL13aA) | 803 | 4e-086 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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