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Information for unigene UN43425
| FASTA Sequence |
| Unigene ID: UN43425 | Length: 901 |
SSR | | GCTCAACAAGAGGTGGTGGTATTAGTCTTTGATGAGCTTTAAAATCTGAAGACAGTAACTGAAAGTACACAATCCAACATTATCGA
AAGTACACAAACCAAAACATGTGCTTTCCTCTCACACATCTCAAGATGATGATCCTTCATTGTTTGGCTCACGAATCTGGATCGAA
GCTTTCGACAAGCTTGCTTCCAATTCATCAAGCTCGTCCATGTCCAAATCATCATCATCATCATCATCTTCGTCGTCTTCATCCAC
TTCTTTCGAACTCTGTTCAGCATCACCACTGCTCTTGCTTGTCCCTGCCTCTGTTTCTTTGTTCTTTTCCTTTTGTTCAATCTCTT
CCTCTTCCTTTTCCCTCTGGTACTCTTCAAAAGCCTCAGCATCATCCACAAACAAGCTTGCATTGGACAGAAACAGCTCCCGACCA
CTCATACGGTCGTTCTTAGCTCTCTCGGCTTGAGAAGCAGCCAAACCTGCATCTCTCTCAGCTATTTTCTTCCTCTTCCACTCCAT
AAATAGCGCAGGTGTCATTTGCGTTGCCGTTTTCAGTTTTGCACGCTCGTTTTCGATTTCTTCTTCGACCGGCATCTGAGATTTAA
GGATATATCCAGGAGGAAGAGCGTGTCTGTAATGACACTCTTTTCCACCATTGGGGCAAGCCCAGAAACACCCATACTGTTTCTTT
TCCACCGCGTCCAGAAAATACTTGCAAACAATATCAGTTGGCTTGTTCTGGTTGTATTCATTTTTCTTCGATTCCACAACCTTCTC
AAGGGTCTCTTGATCCCACTCCTCCATATCTCCATCTTCATCACGCTTGTCGCTGTAGATATCGATCTTCTCACCCTTCCTTTGAA
TGTTCAAATCATGAGAGAACTTGCACTTGAATCCCTTTTGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883934 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 1220 | 7e-132 |
| NP_179618 zinc finger CCCH domain-containing protein 21 [Arabidopsis thaliana] | 1215 | 3e-131 |
| XP_002525195 zinc finger protein, putative [Ricinus communis] | 956 | 3e-101 |
| XP_002456593 hypothetical protein SORBIDRAFT_03g039020 [Sorghum bicolor] | 936 | 6e-099 |
| XP_002312050 predicted protein [Populus trichocarpa] | 927 | 7e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK74 Zinc finger CCCH domain-containing protein 21 | 1215 | 1e-132 |
| Q0JHZ2 Zinc finger CCCH domain-containing protein 11 | 914 | 1e-097 |
| Q54DA5 Zinc finger CCCH domain-containing protein 15 homolog | 539 | 3e-054 |
| A4IGY3 Zinc finger CCCH domain-containing protein 15 | 389 | 7e-037 |
| Q6DD06 Zinc finger CCCH domain-containing protein 15 | 383 | 4e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SGS6 Zinc finger protein, putative | 956 | 2e-101 |
| C5XP17 Putative uncharacterized protein Sb03g039020 | 936 | 4e-099 |
| B9HM02 Predicted protein | 927 | 5e-098 |
| B9MT73 Predicted protein | 926 | 6e-098 |
| B6TD33 Nucleic acid binding protein | 925 | 8e-098 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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