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Information for unigene UN43449
| FASTA Sequence |
| Unigene ID: UN43449 | Length: 953 |
SSR | | CGTATCAAACGGAACATACCTATTCGGCACCAAAACCAATCGTTATTAAGACATATGTTTGTCGCTTATTACAAAAGCATTGTAAG
CTATTTGAACATAAGCAGCGAATAACGCCACAGGAACTTTGATGTTTGCATTAAATAGTCATTAACTAGTAAACAAAGTAGACGAG
TTTCCCCCAGAGCTATTCAATAGTTGTCCAAGAACTCAATTTTTTGTCAAATGTTTGAAGTATAACCCCACATAAATGCTCCAGGG
ATTTACATGTTATGTCCAGCAGCGTTATCATTTGAAGTCTTCAAGTGTGAAGATAATTAGCAGCCATCATTAACTCTAGAGTCAGT
TCAGGCTCGATGTGGAACTCCGTCTCTTTGCCTCTGGAGTACTGTAGAGACCAATAGAAGTACTGGCAGATCTTCTCTAGAATCGT
GGTGCTGATATCAGGGAAAGTCACGACACCATCTTTCGATTCCGAAAAGCCACCTGCACACAACCAATATAAAAGAAAAAAAAAAC
AGAGTGTATTCCTCAGATCTCCATATACTCTGCATCTAGAACAGAGCTTCTTGCAATCTCTTTCTAACACTGAACGCACTATTGCA
AGATCAATACTTTTTCAATGCCCTAATCACACGTCGATATCTAAACACTCTTAGTCTCAGGAAGAAACGGTAAAAGGCTACGACTT
TAGGTTTGCTCAATTAGATCAAAATCTAATCAAAATCGAGTTAGATCAGAAGAAGAGAAAGCGGGGGATTGCGATCACAAACTCAA
CAAGAAAACAGAGGAGGAGGAAGAACCTGGAGAAGTGAGCATGCTCCGGATAGTGTGAGAAACCATGGCGGCTTCCCTGTCGATGA
TGAACTCGAAACCCTCCATGCTTATCAACTTCACCGTCTCCCTCATATTCTTCGTCGTCGTCGTCGTCTCTCGCGTCGGCTTAGGC
TTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_568900 transcription elongation factor B, polypeptide 1 [Arabidopsis thaliana] | 325 | 5e-028 |
| XP_002520493 Transcription elongation factor B polypeptide, putative [Ricinus communis] | 276 | 2e-022 |
| XP_002314149 predicted protein [Populus trichocarpa] | 274 | 4e-022 |
| XP_002282124 PREDICTED: hypothetical protein [Vitis vinifera] | 264 | 6e-021 |
| CBI16050 unnamed protein product [Vitis vinifera] | 264 | 6e-021 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9USX9 Elongin-C | 135 | 2e-007 |
| Q2KII4 Transcription elongation factor B polypeptide 1 | 126 | 2e-006 |
| Q15369 Transcription elongation factor B polypeptide 1 | 126 | 2e-006 |
| P83940 Transcription elongation factor B polypeptide 1 | 126 | 2e-006 |
| P83941 Transcription elongation factor B polypeptide 1 | 126 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FIG0 Putative elongin protein | 325 | 3e-028 |
| B9S3C4 Transcription elongation factor B polypeptide, putative | 276 | 2e-022 |
| B9HPC0 Predicted protein | 274 | 3e-022 |
| C6T083 Putative uncharacterized protein | 263 | 5e-021 |
| A9U1S0 Predicted protein | 262 | 6e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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