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Information for unigene UN43458
| FASTA Sequence |
| Unigene ID: UN43458 | Length: 941 |
SSR | | GTCCATGATTTGTTGTACATTTGTTATTTTTCAAATAAAGCCAACAGTATCTCCTAGATTGGCATTTGAACATACCATTTTCTCAA
TTTGCCAAAACAGACTCGACCTTTGCTAACTCTAATACAAAAAAGAGAAACAAATATTTGTACCACCATTGGTTAATCAATCTGAT
CCCAAAGAGATAAATTGTATATGTTCATGAAAAGTTGGGAAAATTGCTTAAAATGGGATTTTTCGTCATCACCAGGAATGAGTTAA
CAGATTACATCTGAGAGAAGGTAGAGTGCACGTCTCTCCCTTCTTTTTGATCCATCTGAGAGATTGGATTGAAGAGGTGTAACATT
GAAATTTGAAGCTGTTAAAGAAGCTTCAGTCCACCTGTTACTTCATCAACAACTTGGACTGGTCCAAGAATAGCCATAACTGTCCT
TGAATTTGGAGAGATCTGAGTCCTTCCAGCATCGATGGTGATGTGGGTAGGCAGTTTAAGGGATTTGGCTCTTTCTTGCAATTCTA
GCATCTCATCCTCGCCCTCGATTTTCACAACAACCTTTGGCTGTGCACATTCCTCCCAGCAGTCCAATGCTTTTGGAGCTCGACGA
ACAAACTTTTTGTATAAACCCAAAGTTGCATGACTGCATTGTGCAGCAATCTTGCCTTTACCCATTTTAAGATCATTCCTCACTAC
CAAAACCATTTTGAAATCATCGAGGATATCAGCGAGTTTCTCAATCTCGAGAGGACTCTTTGGAATCAGTTTGGTATCATCTCCAT
CAACAGCAGCAGCCGCAACAGAAGGATGATGTTTGGAACGACGAGTGGTGCCAATGCAGAATCCAAGTGCAGCTCCAAAGATTAGA
GCACTCAACCACGCCAAATCCATCCTCAAACGAATATTTATATATCCAGTTCTAGAGAGAGAGAGAGAGAGAACGGCGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568340 Peptidyl-tRNA hydrolase II (PTH2) family protein [Arabidopsis thaliana] | 705 | 4e-072 |
| AAM64624 unknown [Arabidopsis thaliana] | 704 | 5e-072 |
| XP_002873797 hypothetical protein ARALYDRAFT_488549 [Arabidopsis lyrata subsp. lyrata] | 703 | 7e-072 |
| CAC01700 putative protein [Arabidopsis thaliana] | 689 | 3e-070 |
| XP_002884352 hypothetical protein ARALYDRAFT_477548 [Arabidopsis lyrata subsp. lyrata] | 613 | 2e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8R2Y8 Peptidyl-tRNA hydrolase 2, mitochondrial | 343 | 2e-031 |
| Q3ZBL5 Peptidyl-tRNA hydrolase 2, mitochondrial | 337 | 8e-031 |
| Q9Y3E5 Peptidyl-tRNA hydrolase 2, mitochondrial | 337 | 8e-031 |
| O97067 Probable peptidyl-tRNA hydrolase 2 | 308 | 2e-027 |
| Q60363 Peptidyl-tRNA hydrolase | 240 | 1e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1H5E3 At5g16870 | 705 | 3e-072 |
| Q8LBQ1 Putative uncharacterized protein | 704 | 4e-072 |
| Q9LFL4 Putative uncharacterized protein F2K13_20 | 689 | 2e-070 |
| Q9M8U2 AT3G03010 protein | 610 | 3e-061 |
| Q682K1 Putative uncharacterized protein At5g16870 | 589 | 8e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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