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Information for unigene UN43478

FASTA Sequence
Unigene ID: UN43478Length: 770 SSR 
GAGTTCTTAAGATATTTTATTATTAATTTGTGCTTAAGAGACTTTGCTAAGGACAATCTTAAAAATATAGATTATTGGTAGGACTT
TTCAAAATCACAACAAGAACAAATTTAGGAGAGACAAGTGACACAATCACATAAACAAAGGAAAAAAAACAATCTGAAACCAGTTT
TGGTAGTAACACCTTTTTCAAACTTAAGATTCAGGGACGGCTTCTACGGCGGCAGTACAAGATTCCTTCAAGAGCTGCGTTGATTG
TAACTTCTTTTCTCCTTGAAAAGCTGAGCGAAACGGTGTCTGCAGTACAAGATTCCTTCAAGAGCTGCGTAGTTGGAAGGAGAGAT
AGGACAGCCTCCGTGCGAACACTTGAAGCAGGACTGCAAGTGGCACATTTATCTTGCGTTCCAGAGAACATTCCTGCAACTCGGTT
AGGTGTCCTTGTCAGCTCAGGGGTTGGCTTGTCAGTTAATGGCTTTGCAGGTGATTGAAAGTTCTTGTTGAAACTACCAGTCTCCT
TGAAGAGCTGCTCAAAATGAGGCTTACAGTACAACACACCTTCCATCGGCATCGTTTTCCTTTTTTTTTGGCTTCTTCTTCACTAT
CTGCTCTCACGAGAGCGAGAGAGAGAGATAGAGAACCGAGAGAAACAAAGTCAGCGCCTTTCGATTTCGATTCACAAAGCATCTGC
TTGAATTTACTCAGTTTGTCGCGATGATTGTGAGCAAGAGGGAGAGAGAAACGCAAGAAAGAACAGAGAGAGTGACGCGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879831 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]3308e-029
NP_181519 LIM domain-containing protein [Arabidopsis thaliana]3227e-028
NP_001049655 Os03g0266100 [Oryza sativa Japonica Group]2842e-023
AAK49580 transcription factor L2 [Arabidopsis thaliana]2188e-016
NP_191136 GATA type zinc finger transcription factor-like protein [Arabidopsis thaliana]2188e-016

Swiss-Prot top hits (Blast detail)Scoree value
P29675 Pollen-specific protein SF31655e-011

TrEMBL top hits (Blast detail)Scoree value
O04193 At2g39900/T28M21.63225e-028
A2XEV9 Putative uncharacterized protein2841e-023
Q84Q79 Os03g0266100 protein2841e-023
A5BSA7 Putative uncharacterized protein2186e-016
B9DH94 AT3G55770 protein2186e-016

Arabidopsis top hits (Blast detail)Scoree value
AT2G39900.1 LIM domain-containing protein3223e-030
AT3G55770.1 LIM domain-containing protein2848e-026
AT3G55770.2 LIM domain-containing protein2848e-026
AT3G55770.3 LIM domain-containing protein2848e-026
AT3G55770.4 LIM domain-containing protein2848e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information