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Information for unigene UN43480

FASTA Sequence
Unigene ID: UN43480Length: 672 SSR 
ACAATCCAAGCTTTTAATGTAACAGCTAAAAAGCCTATTGGGTCCTTCTTTTGGATTACACTTCTCTAATACGACTTGCTCAGAAA
TAAATAAAGAAAGAAAAAAAACAACTTTTCTATGCACAGATATATATATATGGATTGCAGCTACTTGGAAGAGTCAGTAGGAGGGA
ATGGCTGCGAAACGGTACCCTTCAGCTCCTCTCCATGAATAGTACGCAATCCTTGTCTCGTAGAAAGGGAGGAAAGTAAGGAAGCC
AAGGAGAAGAAGAGCATAACCCTGAGAGCTGCCATCTCCTTCCATGTGACCGGTGAAGATGAAAACTGCCAAAAGAAGAAGCAAGC
AGCCAAGGAAGAGAAGAAACACAGCTAATGCTATTGATCTCCATGGCACTCTATCAAAAGCTTTGGGTGTATAATCAAAACGAGGA
TCGAAATCTCTCCTTCCACCATCATCATCATCTCCTGGAAGCTGAGCGTACCGTACACTTCTCCTTGACGCCATTCCTAGTCAGTA
TATAATAATAAGCCCTTCACTATCAACGCGAAATATACCGGTTAACACAAACCGGATCCGAGATTGAGAAGCTTAACCGGCTCAAA
AAAAACCTGATAACTACTATTGTGAAGAGAACGGCGTGCCGGGAAACTCACCGGAGTTAAACTAAGTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877160 hypothetical protein ARALYDRAFT_905208 [Arabidopsis lyrata subsp. lyrata]5223e-051
NP_566844 uncharacterized protein [Arabidopsis thaliana]5162e-050
XP_002284020 PREDICTED: hypothetical protein [Vitis vinifera]4141e-038
XP_002308035 predicted protein [Populus trichocarpa]4132e-038
ABK94415 unknown [Populus trichocarpa]4122e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q5ZLH4 UPF0414 transmembrane protein C20orf30 homolog1735e-012
Q96A57 UPF0414 transmembrane protein C20orf301735e-012
Q5R8X3 UPF0414 transmembrane protein C20orf30 homolog1718e-012
Q5E975 UPF0414 transmembrane protein C20orf30 homolog1682e-011
Q8CIB6 UPF0414 transmembrane protein C20orf30 homolog1682e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LVP2 At3g291705161e-050
B9H9W7 Predicted protein4131e-038
A9PDG2 Putative uncharacterized protein4121e-038
C6SV59 Putative uncharacterized protein3914e-036
B4FHH3 Putative uncharacterized protein3896e-036

Arabidopsis top hits (Blast detail)Scoree value
AT3G29170.1 unknown protein5176e-053
AT2G19350.1 unknown protein1441e-009
AT4G29850.1 unknown protein1385e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information