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Information for unigene UN43496
| FASTA Sequence |
| Unigene ID: UN43496 | Length: 1326 |
SSR | | TAGTTTACAAAGGTACTTTGTCTACTAACCAATATGGTTGAAGAAGATTCTTAAGCTCTATTAAGAACTTTTAGACGTAGAGATGG
AAGAAGAAGAAGAAACCAAGCTAACAGTGGGATCTAGCATGCTCAGGTTTGTGAGTATACTCATAATCAAGATGCACAAAAGCCCT
TTCTATCTCCTGCATCAGCTCCAGCTTCTCTTGCAGCGATTCCCCAATGTCGTGCGCCACTTGCAGAGGCATATCAGCAGGGAGAA
CTATATCAACCTCCACAAAGTAATGAGATCCAAACGTGTAAGCCCTCACCGTGTCAATATGCCTAATCTCTCTATGGTGGTTCCAA
CACAGGTAAGTCAGTTTCTGCAGATACTCTGGCGTTGCTGTTTTCCCAACTAGAGAGTTCACGCTCTCCAAAACCGTCATTGACCA
CGTCCTTATCGTGTACAGTGCAAGAATGATGGCTCCAACTGGATCCATCCAGTTATCGATGTAGTTGGCGAGGATCACTGCAACGA
GTCCAATGATGTTTGTGATGACGTCGAAAAAGTGGTCTTGAGCATAAGCTTTGACAATCTCGTTACTGAAGGATCTGCAGTAAAGG
ACGAGAAGCAGTTTGACCAATGTAACGGAGAGCATGATCCCAACCACCCAACTCTCTTGCTCTTTTTGTTAGGCTGAACTCCTTGT
GACTGGATAACATTGTACGAAGAGATTCCAAGATGATTTGCAATCCAAGTGTGGCCATCACTGATGCAAATACTAGGATTCCCAGT
GGTTGCATCCTTTTCTTGCCAATGGGATACTGATACGGGTTTGGTGTCTGCATAGAGAAGGCGGTAAACCAGAGGATGAAGCCAGA
AAGAAGATCAAGAAGAGAGTCCAGCGTGGAAGCAAAGATTGCTAAAGAGCCGCTTGTGACGGAGGAATAGACTTCAACAGCAAAGA
GAAGCATGTTTGCAATGTTTGATATCCTAATGGCCATTGTCTCGCTTTTAGCCAGATTGTCTTGCTCTTCCTTTGACATTCCAGGT
ACAAAGCCGCGTTCAGCAAGTTCATCCATTTCAGTAAAGCCCTCAAGCATCTCTACTTGTTGCTGGTAATAATCCGCCACATTGTC
TTCCGGACCCAAGCAACCAAGACAGTTATGGAGTTTGCTCGTCGATTTCTTCTCCTTGTGCTCCAGTGAAACCTGGAAATCGTCGA
AATTTAGCTGCCACGAGCGGTCACCGTTACCTTGAAACTCCAGCAGCAATATCCCTTCGTCGTCTCCATCTGGCCTAACCATTACT
CGGTTAGAGAGAAGAGATTATTAAGCTTGGTCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181477 putative Mn-specific cation diffusion facilitator transporter [Arabidopsis thaliana] | 970 | 1e-102 |
| XP_002881656 cation efflux family protein [Arabidopsis lyrata subsp. lyrata] | 969 | 2e-102 |
| XP_002862450 cation efflux family protein [Arabidopsis lyrata subsp. lyrata] | 968 | 2e-102 |
| BAH20368 AT2G39450 [Arabidopsis thaliana] | 932 | 3e-098 |
| XP_002533664 cation efflux protein/ zinc transporter, putative [Ricinus communis] | 885 | 9e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M2P2 Putative metal tolerance protein C3 | 572 | 7e-058 |
| P21559 Protein p34 | 132 | 8e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| O80632 At2g39450 | 970 | 8e-103 |
| B9DI01 AT2G39450 protein (Fragment) | 932 | 2e-098 |
| B9T5Z5 Cation efflux protein/ zinc transporter, putative | 885 | 6e-093 |
| A4ZUV2 Metal tolerance protein | 884 | 8e-093 |
| B7FHN3 Putative uncharacterized protein | 873 | 2e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39450.1 MTP11; cation transmembrane transporter/ manganese ion transmembrane transporter/ manganese:hydrogen antiporter | 970 | 5e-105 |
| AT1G16310.1 cation efflux family protein | 691 | 1e-072 |
| AT1G79520.1 cation efflux family protein | 681 | 2e-071 |
| AT3G58060.1 cation efflux family protein / metal tolerance protein, putative (MTPc3) | 572 | 7e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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