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Information for unigene UN43520

FASTA Sequence
Unigene ID: UN43520Length: 854 SSR 
TACTCAAAATGCAAAAATTCTTAAGATTTCTTCTTAAATGAAATGGCCATCAAACAAAACATGCATCATCTCTCTTATACATATGG
AAACAACAACAAGGGCAAAACATTTCCTAGGTAAAGGAAGAAGAGCCTGCTCCCTTGGTAGAGGAAGTCACACCTCTGCAACCAGC
ACCTTCATGCCATTCAAGCATGATTTCAATCTCGCCGCACTCAACATTGTTGAGCCTAAGGATCATGTCCTGAGTGATCTTACCAT
TGTTCCACACAATGCTACTTTCATCTGATAAACAGTTTTCCCTCGATGGTTGAACCCTTTTGATAGCGCATCCATTAGGGAGCCTC
AAAAGCTCCATCCCCATTTTCAGAGCCTCCAAGTATGGTTGAATGTCTACGTTGGCATCTCCCATCTTGTCATCTCCAGTGAACTT
GTCCCAGTCAAACACTGTCAAGCGGATTGGAACATTGGGATCTTTGATTGCAACGGTCATTTCTTCATTCCATATTGGATTGCAGT
TTTTTTTTCACCACACGTGTCTTCAATGTCTGATCGGCGACGGTGATAACAACATAAGGATCGCTGCTTCTATGGTCACGAATGGC
GAGATTAATACCTCTTTTGATATGAATTGTTAGCAATCCTAGAGGCTTTTGATCCATGTATTTGTCAAGATTCAAGATTGGAGAAT
TTGACGAGGATTCAAGAAGACAACGAGGGAGAATTATAAAAAAAGAAGAAGAGAGATTTGGGGATGATGATGATGATTGATTGGAA
GAAAATGCTTCTCTCTGTTTTCCTCCTCCACAACTATTCAACACGACCTCTCCAACAATTGCTCGGAAATGTAGAACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63403 C2 domain-containing protein [Brassica rapa]7036e-072
NP_178263 calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana]7027e-072
XP_002876756 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]6883e-070
XP_002887328 C2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]4813e-046
NP_565001 calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana]4795e-046

Swiss-Prot top hits (Blast detail)Scoree value
Q8L7A4 Probable ADP-ribosylation factor GTPase-activating protein AGD112203e-017
Q8LFN9 Probable ADP-ribosylation factor GTPase-activating protein AGD132104e-016
Q9FVJ3 ADP-ribosylation factor GTPase-activating protein AGD122086e-016

TrEMBL top hits (Blast detail)Scoree value
Q9ZVF1 Putative uncharacterized protein At2g015407025e-072
Q9S7J9 At1g707904794e-046
B9SP79 ARF GTPase activator, putative4543e-043
B9HJD0 Predicted protein4444e-042
B9HW51 Predicted protein4382e-041

Arabidopsis top hits (Blast detail)Scoree value
AT2G01540.1 C2 domain-containing protein7023e-074
AT1G70790.2 C2 domain-containing protein4792e-048
AT1G70790.1 C2 domain-containing protein4792e-048
AT1G70810.1 C2 domain-containing protein3914e-038
AT1G70800.1 C2 domain-containing protein3905e-038

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  86%
 
101  14%

Unigene MembersMember information