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Information for unigene UN43521
| FASTA Sequence |
| Unigene ID: UN43521 | Length: 1032 |
SSR | | ACTAAGCTTGTCTATATTCTTCCAGCAATCAAATCACTTACTAGTTTCTAATCACACTTTTAAGTACATGGTTCCCCTGAACCTTC
AATAACACAACCAAAAACAAGAAAGAAATAAACAAAACAACACCCAGCCAGGAACAAAAGAGCAATAAACATGAAGATTTACCTCA
GGTAATTATTTCTTGGATTTGTGGGTTTTATTGGTGAATCTTCGATCATACGAATCCTCTGTTCTCGAGCTTTGGTTTGAAGTGTA
ATCAATGCTTGCATACATCTAAGTGTAGCTGTTGCTTGTTTCCTTACTAAATGACCTCTCACAAGTGCTTGTAATTTCACCAACCC
TTTTAACGCTCTTAATGCTTTTTTCGCCAAATGAGAACGAAAGCAAGCTTGGATCTTCACTGCTGCAAACTCTTCAACAGCCACTG
CAACCTCTACGGCTGAAACGTTCTTGCTATTGGTCATAATTGTACTGGTAGATCCACATTCACTCTCCATAAGAGAAATGTTAGAT
CTATCGAGCTTAATTGCCATCCACGGATGATGATGATGATGATGATGATGATGACTTTGACTTTCCTTGCCTAACTGAGATGAAGA
TCTCTGCATCCTTACAGCTCTGGGGACACCGTTCCTCGGTGCTTCCATGCAAGATCTTCTCCTCCCGCTTGGCTGCTTCTCATAGA
TCTCAGGAGGTCTCTGCTTAGGCGCACTCTGAGAACGAGCCTTGGCTTTAGAAGGCTGAGTATTGGCCATGTAATTTGGGAAGAGA
GGGTAATCGTAAGAAGACAAAGAATCTCCATTGTAATACTCTTTGAATCTGGAACACTGAGGACTGCTTTGTGCTGTGTTGAACGA
GTTACAATCCTCGAAATGGCTACTATACGCTCGAGGACTCATGTCTGTTATAGCCGAAGGAGCTGGAGAGTAAAATCTAGACTGAG
TGTCCATTTCCACAATCTTGATGTTTTCTTCATTCTCGTGGTAAATGTTATGAATCCGGGTTTTGTGAACCGATGTTCTTGGATTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193211 protein IQ-domain 19 [Arabidopsis thaliana] | 884 | 8e-093 |
| AAL86322 unknown protein [Arabidopsis thaliana] | 884 | 8e-093 |
| XP_002870287 IQ-domain 19 [Arabidopsis lyrata subsp. lyrata] | 867 | 8e-091 |
| CAB10254 hypothetical protein [Arabidopsis thaliana] | 805 | 1e-083 |
| CAN66770 hypothetical protein VITISV_013810 [Vitis vinifera] | 291 | 5e-024 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4D8 Protein IQ-DOMAIN 31 | 180 | 2e-012 |
| Q8LPG9 Protein IQ-DOMAIN 14 | 169 | 3e-011 |
| Q9SF32 Protein IQ-DOMAIN 1 | 162 | 2e-010 |
| Q9FXI5 Protein IQ-DOMAIN 32 | 145 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RXR4 Putative uncharacterized protein At4g14750 (Fragment) | 884 | 6e-093 |
| O23331 Putative uncharacterized protein AT4g14750 | 805 | 8e-084 |
| A5AI31 Putative uncharacterized protein | 291 | 3e-024 |
| B9RTL0 Calmodulin binding protein, putative | 281 | 5e-023 |
| B9HK97 Predicted protein | 276 | 2e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G14750.1 IQD19 (IQ-domain 19); calmodulin binding | 884 | 3e-095 |
| AT1G01110.2 IQD18 (IQ-domain 18) | 233 | 1e-019 |
| AT4G00820.1 iqd17 (IQ-domain 17); calmodulin binding | 226 | 6e-019 |
| AT2G26180.1 IQD6 (IQ-domain 6); calmodulin binding | 222 | 2e-018 |
| AT3G16490.1 IQD26 (IQ-domain 26); calmodulin binding | 220 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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