Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN43528

FASTA Sequence
Unigene ID: UN43528Length: 709 SSR 
GGATATCAGGAGGCTCATGGCAACCACAACGTATAATATTAGTTTCGTCCCAGTAGTCACTCTAACTGAGACCTCTCACACAATGG
CCAAGATCCCTTCCAAGTTGAGCTAATGATTAGTTTTTTTTTTTAACATGGCATACGAATAAAGGAACTAACTTTGGATCAAAATC
TAAATGCTATGAGCTAAGAAAAAGCGTTGAAGAAGAAGAAGAAGAATACATTTGATCAAGCTGTTTGTTGACTTCATCGACATCTT
CGAGGTCAGTAAGCAATTGACGCACGATTGCACCGTACGTCAATGTGAACAACTCTGCATTCTACAAAATTTATCGAAATCCAAAG
AGAATCAAACATTGGCCTCTAAAACGAGAAACAGATTTGTTAAAAATCTGAACTTTTTTTTTTTTTACCACGCGATCGATGCTGGA
GAAGATGGCATCACTGGAACGAGGACCAACAGGAGCCATGTCTGAATCTCACCGACTACATTTAGATCCACACAAAAACAAAAATT
TGCTATAAAAACATTCACTTTGCCTAGAAATTGATCTCTTAATCGAACGCAATTTGATCAAAAGCTAGTTTGCACTTTACTTTTGT
CTCAATTTCAATCTCGAGAATCAATCACAAATTGCGAAAACTAGTCGATGAAGATCGATTAAAGATCTAACAAATACAGAATAGAA
AAGGGGCGTGACAAAGATCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001190539 Transport protein particle (TRAPP) component [Arabidopsis thaliana]1757e-011
ACJ86016 unknown [Medicago truncatula]1595e-009
NP_001050321 Os03g0402000 [Oryza sativa Japonica Group]1551e-008
NP_200286 Transport protein particle (TRAPP) component [Arabidopsis thaliana]1551e-008
XP_002281399 PREDICTED: hypothetical protein [Vitis vinifera]1551e-008

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
B7FMN3 Putative uncharacterized protein1593e-009
A2XHR5 Putative uncharacterized protein1551e-008
A5AU19 Putative uncharacterized protein1551e-008
A9PCZ9 Predicted protein1551e-008
B4FFB0 Putative uncharacterized protein1551e-008

Arabidopsis top hits (Blast detail)Scoree value
AT5G54750.1 transport protein particle (TRAPP) component Bet3, putative1556e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information