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Information for unigene UN43602
| FASTA Sequence |
| Unigene ID: UN43602 | Length: 1046 |
SSR | | AAACACCATAAGAATTTATTTTCCCCATTATATGCAAATATTAGTTAACATTATAAATTCGACCCTATTTTTTACTTTTTTATCAC
AAAACACTCTTAGATTGGTTCTTCTTGCTTCGCTCATTTCATCTTGAACTTGAAGCCTTGAGTACTGATTTAGCATAAGCTAATGG
CAACGCTGCAATTTTCTTGGCTTTCCCTACATAAGCTCTCTTTGTAAAGTTGTTGTAATCATTCGCTTCAATCTCGTCCAATATCC
TCCTGTACAATAGGAGCGATGCCCATACGGGCCATCTGCTAGCTGCGTCAAGCTCGGTAACACCTTTCTCAGCTTCATCAAAGAAC
ATTCTTGCTCGCTTGAGCTGCATTTTCATGAAGTTTCTCCATTTATCAGTGAATTTTCCAGCGAATATGTCTTCATCCGAGATAAA
AAGTTTTAGCATATTCAGCACAAACTTCACCGCAACGATCATAAGCTTCACCCAACAAACTCAAACTCCCAGTCCCTGTACCAGGG
AGAACGATATCCTGTGGTTTCTTCACATCATCATCATCAAGGTCCCTAAGCTGTTTGTTCACCAAAGCTGCTTGTTTCAGCACAAC
ATTGTAAACCTTCTCTTCGGATGAGAGGGTTATCTCTCCTGCAGGACTTGCTACTAAGCTTGACGAACAACACTGCTTAATCTTCT
TCTTCTGCAGCTCATCACAGAAGAAGAAGAAGAGGAAGAAGTCCCCCTACCATTGTTGACTCTCTGATTCAGACAAGGAGAAAGAA
ATCTAGAAGATTCCAGAAATCTCACCAATCCACAATTGGTCATTGGGTCTGGATTAGGAGAAGAAGCTGCAACCCATAACACTGCT
ACAGAAGACATAACTCAGGTTCTTGACACACACGGAGATGGAAAAAAAATCTAACTTTTTTTTTTGTCTACTCTGTTTCTTCACTT
GGAAGAATCAAAATCCAAAAACTTTGCGGAGAAACCCAAATTTTGATAATGGATCAAACTTGTAAAGATGAATGCTTTCCCTTTGA
TAATAGACAAGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ACT20708 chloroplast phytoene synthase [Brassica rapa] | 493 | 2e-047 |
| NP_197225 phytoene synthase [Arabidopsis thaliana] | 488 | 7e-047 |
| AAM62787 phytoene synthase [Arabidopsis thaliana] | 488 | 7e-047 |
| AAA32836 phytoene synthase [Arabidopsis thaliana] | 488 | 7e-047 |
| ACB20515 phytoene synthase [Arabidopsis thaliana] | 488 | 7e-047 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P37271 Phytoene synthase, chloroplastic | 488 | 3e-048 |
| P49293 Phytoene synthase, chloroplastic | 414 | 1e-039 |
| P53797 Phytoene synthase, chloroplastic | 410 | 3e-039 |
| P49085 Phytoene synthase, chloroplastic | 403 | 2e-038 |
| P37272 Phytoene synthase, chloroplastic | 402 | 3e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C7DR83 Chloroplast phytoene synthase | 493 | 1e-047 |
| B2CNE7 Phytoene synthase | 488 | 5e-047 |
| B6V1Z8 Chromoplast phytoene synthase | 488 | 5e-047 |
| B9MWW1 Predicted protein | 436 | 5e-041 |
| Q0PZK5 Phytoene synthase protein | 427 | 6e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G17230.1 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | 488 | 3e-049 |
| AT5G17230.2 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | 488 | 3e-049 |
| AT5G17230.3 phytoene synthase (PSY) / geranylgeranyl-diphosphate geranylgeranyl transferase | 488 | 3e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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