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Information for unigene UN43610
| FASTA Sequence |
| Unigene ID: UN43610 | Length: 815 |
SSR | | CGAAGCAAATGAATATTTTCAATATTCCTAAAGAATTAAAATAGTGTTTACAAATTTACAGAGGAGTGATTTTTTTCTCCTCTATA
TGGAATGAACATCAATGGGTTTATATATATGGAAATGAAGTGCAAAGAAAGGTTGATTTGTAACACACACACAAGTCATCATCGAG
GATCTGCTTTTCCAGCGATTTCATCGTTGTCATCCGAGTCTGAACCACGTTCGCTCATGCTATCATCATCATCGTCATCTTCATCA
TCACTTAAATCCTCAGGTGCTCCTATGTCCTCTGGTTTAGCATATGCTTTGCAGTACTCTTTGACTTTCTTCTCATAGGCTGCACG
GTCTCGCATCAAGAGAGAGGCAGCTTCTCCATTGAATGGATCAGATGGGTTTGGATATAGAAGCAGTTGAGGAAGAAATGACTCGA
AGACATTGATAAGATCAAACATTGGGCTCCGTGTCTGGTTTATTACATCTAAGCAAACAGCACCCGAAGATTCATCAACATTGGGG
TGATAAATCTTGTTAACGAAACCAACAGAAGGAGATTTGTAAGGATAAGCTTCAGGAAGTTCGACTTTGATCTTCCATACACCTCC
CTCATATAGACTGTCAGTGGGGCCATGGAAAGTAACATAGAACATCTGCAAATCGTCGTTGACAGTATCCACCTTGTAATCACTCA
TCGTCAATTTCATCATGTCCATCTCTCGGCGTTTGCTCGGCGAAGCCATGCCCCCCGATGATTCTTCTCCCTTCCTTCTTCTTCTT
CTTTCTAGATTCTGGTTTCAAAGAGAGAGAGAGAGAGAGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882046 ubiquitin-conjugating enzyme 6 [Arabidopsis lyrata subsp. lyrata] | 869 | 3e-091 |
| NP_566062 ubiquitin-conjugating enzyme E2 6 [Arabidopsis thaliana] | 818 | 2e-085 |
| XP_002868603 hypothetical protein ARALYDRAFT_493844 [Arabidopsis lyrata subsp. lyrata] | 736 | 8e-076 |
| NP_568589 ubiquitin-conjugating enzyme E2 4 [Arabidopsis thaliana] | 720 | 6e-074 |
| ABB47726 Ubiquitin-conjugating enzyme E2-23 kDa, putative, expressed [Oryza sativa Japonica Group] | 717 | 1e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42750 Ubiquitin-conjugating enzyme E2 6 | 818 | 1e-086 |
| P42748 Ubiquitin-conjugating enzyme E2 4 | 720 | 3e-075 |
| P16577 Ubiquitin-conjugating enzyme E2-23 kDa | 697 | 1e-072 |
| P42749 Ubiquitin-conjugating enzyme E2 5 | 693 | 3e-072 |
| Q9P7R4 Ubiquitin-conjugating enzyme E2 8 | 577 | 1e-058 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A5B1R0 Ubiquitin carrier protein | 717 | 9e-074 |
| B8BH65 Ubiquitin carrier protein | 717 | 9e-074 |
| Q337R4 Ubiquitin carrier protein | 717 | 9e-074 |
| B4FFL4 Ubiquitin carrier protein | 715 | 1e-073 |
| B9RDU4 Ubiquitin carrier protein | 715 | 1e-073 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G46030.1 UBC6 (ubiquitin-conjugating enzyme 6); ubiquitin-protein ligase | 862 | 8e-093 |
| AT5G41340.1 UBC4 (UBIQUITIN CONJUGATING ENZYME 4); ubiquitin-protein ligase | 725 | 6e-077 |
| AT1G63800.1 UBC5 (ubiquitin-conjugating enzyme 5); ubiquitin-protein ligase | 693 | 3e-073 |
| AT1G64230.1 ubiquitin-conjugating enzyme, putative | 243 | 5e-021 |
| AT1G64230.2 ubiquitin-conjugating enzyme, putative | 243 | 5e-021 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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