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Information for unigene UN43640
FASTA Sequence |
Unigene ID: UN43640 | Length: 514 |
SSR | | CAAAGAAAGCAGATTTTCATTAAAAAAAAAAAAGGAGATGTTTAGCAACAAGAAAGAGTGGCAGCATCTACTCAAATAGAATTACA
GTGATAAGAAGACCCTCTAGTTGGAGAAGAGAGACTCGTCGATGTCGATTTTGATCTTCTCGTCGTTCTCAAACTTATCCTTCCTC
GGTGGTGCAGGAGGGACAGGGACTCTCTGTGGACCTCTTCCTTTATTCTTGTTCCTTGGCCTCGCATTCCCGAAAGAGTGATTAAA
GCGCTTTCCTCTCGCAGTTTTGCGGTCACCTCGGCCACAGTACACAAGTGGAACTGAGCTGGATGATGACGAAGCGGAGAGAGACA
GTTGCTGAGGGAGGCAAGAGAGAGAGAGAGTTTCCGAGTGAGATGATGATAATAACCTCGGAGATGTTGCGACGGTGACTCGCGGA
GGAGCTCCGAGTAGAAGCGACGCCATCGCCGTGAATGTCTGTCTGAGGAGGAGGAGGAGGAGGATAAGGTTGAAATGATATTCC
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GenBank top hits (Blast detail) | Score | e value |
NP_181349 30S ribosomal protein S31 [Arabidopsis thaliana] | 499 | 8e-049 |
XP_002879729 plastid-specific ribosomal protein 4 [Arabidopsis lyrata subsp. lyrata] | 487 | 2e-047 |
CAN83819 hypothetical protein VITISV_030951 [Vitis vinifera] | 370 | 7e-034 |
XP_002274396 PREDICTED: hypothetical protein [Vitis vinifera] | 365 | 3e-033 |
CBI30407 unnamed protein product [Vitis vinifera] | 358 | 2e-032 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O80439 30S ribosomal protein S31, chloroplastic | 499 | 4e-050 |
P47910 30S ribosomal protein S31, chloroplastic | 264 | 8e-023 |
P47909 30S ribosomal protein S31, mitochondrial | 126 | 8e-007 |
TrEMBL top hits (Blast detail) | Score | e value |
A5C1F7 Putative uncharacterized protein | 370 | 5e-034 |
B9SZC7 Structural constituent of ribosome, putative | 330 | 2e-029 |
B9IG72 Predicted protein | 306 | 1e-026 |
C5XFH5 Putative uncharacterized protein Sb03g043130 | 267 | 4e-022 |
A9NME7 Putative uncharacterized protein | 266 | 6e-022 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G38140.1 PSRP4 (PLASTID-SPECIFIC RIBOSOMAL PROTEIN 4); structural constituent of ribosome | 500 | 3e-051 |
AT2G21290.1 unknown protein | 108 | 1e-005 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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