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Information for unigene UN43663
| FASTA Sequence |
| Unigene ID: UN43663 | Length: 908 |
SSR | | GGCATTTCATAAAGAGATTTAGATGTCATAAGATCCACAAAGATAAAGTCTTACACATTTTTTTATTTGATCGAGTTTGCTTCTTC
CAACTTAAAGCTATATATACGACTCTCATAAAACCCTGAAAAAATCTTCACTGAAAGTGCTGCTTCATTGCCTTTTAGTCCTCCTT
TGCAGCATCACCATTTGCAACATCCTTCTTCTCCGTGGTTTCTTCCTTTTTCTCTTCTATGCTTGTAGAAGTCTCACCTTGGGTAA
CCGCTGAAGGTTCTTCTGCTTCTTCTCCGGTGTTTGTAGCAGGTTCCGAGTCTGCTGCACTTTCTTTGCCTTCTCCATCACCACTC
TTCTGAATGGTACCGACTTTGACATAATTGCTCATGAACTTGTACTCCCAGTCTTGCAACGCATCTAGCTCAAATGGACCTAGACC
CGAGATGTCTCCGGTCAAATCGGATTCCTCAAAAGACATCTTAGCAAGAGCTCGGCTTGCATCTTTCCCTGCAAACAGAGCGTATG
GTCCACCTGGTCCATAGAACATCCTGCTCTGGGAAACATCGTAGATCTGGCCTTTGATGGCCATGAGAAGGGGGTTTTTGGGATCG
GAGCCGTCGTACTGCTTAAGCTCCTCCTCCGTGATTTCTCCGAGCTGAACCGGAGGCGGAAGGGGCTCAGGCTGAGGGTAATCCTC
GGTAGAACGAGGACGGTGTTCCTCGGGGGAGACGAAGAAGCCGGAGACGACTTGGTAGACGGCGAAAGCGAGAGCCAAGACGGTGA
AAAAGGCAGCCGGAGAGAGTCCGGTGTAAGCTGTGATTGTTTCCTTGACCGTCTCCCATAGTTCAACCACCATGATTAAAGGAGAG
AGAGTAGAGAGAAGCGATATAGAGAGAGAGAGAGATAATCGGTGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875931 membrane-associated progesterone binding protein 3 [Arabidopsis lyrata subsp. lyrata] | 909 | 8e-096 |
| NP_190458 membrane steroid-binding protein 2 [Arabidopsis thaliana] | 905 | 2e-095 |
| AAD34615 putative progesterone-binding protein homolog [Arabidopsis thaliana] | 833 | 5e-087 |
| NP_001149328 membrane steroid-binding protein 1 [Zea mays] | 738 | 6e-076 |
| EAZ16597 hypothetical protein OsJ_32072 [Oryza sativa Japonica Group] | 734 | 2e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M2Z4 Membrane steroid-binding protein 2 | 905 | 1e-096 |
| Q9XFM6 Membrane steroid-binding protein 1 | 694 | 3e-072 |
| Q9SK39 Probable steroid-binding protein 3 | 263 | 3e-022 |
| O55022 Membrane-associated progesterone receptor component 1 | 250 | 1e-020 |
| P70580 Membrane-associated progesterone receptor component 1 | 248 | 2e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B6TD62 Membrane steroid-binding protein 1 | 738 | 4e-076 |
| A3C684 Putative uncharacterized protein | 734 | 1e-075 |
| Q9FVZ7 Membrane steroid binding protein 1, putative, expressed | 729 | 4e-075 |
| B6TM12 Membrane steroid-binding protein 1 | 728 | 6e-075 |
| A2Z932 Putative uncharacterized protein | 725 | 1e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G48890.1 ATMP2; heme binding | 905 | 1e-097 |
| AT5G52240.1 MSBP1 (membrane steroid binding protein 1); steroid binding | 694 | 3e-073 |
| AT2G24940.1 AtMAPR2 (Arabidopsis thaliana membrane-associated progesterone binding protein 2); heme binding | 263 | 3e-023 |
| AT4G14965.1 AtMAPR4 (Arabidopsis thaliana membrane-associated progesterone binding protein 4); heme binding | 186 | 2e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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