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Information for unigene UN43681
| FASTA Sequence |
| Unigene ID: UN43681 | Length: 688 |
SSR | | GGGATCATTGTACAGTTAGTAAGTGGTCTCAACCATACATGATCGTCTTATAAAATCATTAAAACGATCCACAGCGACTAAACTAG
CAATTAGACATTTGTTTAGAGAGATAAATGCCAACATTGGGCTTCAAAGATAATGGGTCGAAGGAGCCGCAGACGTTAGCAGGCCC
AAAGAGACATATCTCAAGAGAACGAACCGGTGAGACTCCCCGTGACACCAACCGACGGCTATGGCAACAATTTTCAGATTCTCACT
TCGTCTACTCCCGGTTTCCGCCGCCTTGACATGTTGCTCAATCCGGTTCCCCGATTCAAGACCCGCTTCGTTGAACCTAATCTGTA
TCATTTATCTTCTTCTTCTTCTTCTTTGAAGACCAAAGCAGGTTGGCTACTGGGCCTCGGGGACAACAAGAAAAAGAAAGTGGATT
TACCGGATCTCGTGGCAGCTGGAGATCCGGTTCTCCACGAAAAGGCCCGAGAAGTCGACCCGGAAGAAATCGGGTCGGAGCGTATT
CAGAAGATAATTGATGATATGGTAAAAGTAATGAGATTAGCTCCTGGAGTTGGCCTTGCTGCTCCTCAGATTGGTGTCCCCTTAAG
AGCAAGAAAGCAAGCCTGATGGTTCTCATCTTTAAAAAAAAAAATGTTAATGATTAAATAAACCGGTTTTCATGGTTGATGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002890102 hypothetical protein ARALYDRAFT_334826 [Arabidopsis lyrata subsp. lyrata] | 390 | 7e-036 |
| AAD39667 Simalar to gi|4377403 Polypeptide Deformylase from Chlamydia pneumoniae genome gb|AE001687 [Arabidopsis thaliana] | 377 | 2e-034 |
| NP_563974 peptide deformylase 1A [Arabidopsis thaliana] | 377 | 2e-034 |
| XP_002298107 peptide deformylase [Populus trichocarpa] | 345 | 1e-030 |
| BAJ53237 JHL06P13.18 [Jatropha curcas] | 337 | 1e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FV53 Peptide deformylase 1A, chloroplastic | 377 | 1e-035 |
| Q9FUZ0 Peptide deformylase 1A, chloroplastic | 277 | 4e-024 |
| B6RGY0 Peptide deformylase 1A, chloroplastic | 203 | 2e-015 |
| Q7NJV3 Peptide deformylase 1 | 140 | 3e-008 |
| B0SHH1 Peptide deformylase | 121 | 6e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GKW9 Peptide deformylase | 345 | 8e-031 |
| B9RV35 Polypeptide deformylase, putative | 335 | 1e-029 |
| B7FJE4 Putative uncharacterized protein | 281 | 2e-023 |
| A9NQN9 Putative uncharacterized protein | 233 | 8e-018 |
| Q2HVV7 Formylmethionine deformylase | 215 | 1e-015 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G15390.1 PDF1A (PEPTIDE DEFORMYLASE 1A); peptide deformylase | 377 | 1e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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