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Information for unigene UN43688

FASTA Sequence
Unigene ID: UN43688Length: 988 SSR 
CTTCATCTCTGTATCTAGTTTGGTTGTCAACCCACTGTCAGTGTCCAAAAGATTTGCCGGGTGGCTCACCAGATCATTGTTCTCTG
TTTTATCTCCTTCCAATTCTTGGACAGATTTCTCCCCCATCTCAATCTCTTTTCCTTTTCCTGTTGCAATACTATCTAGTTTTTCT
CTGGGTGAAGATTCACAAGCAACATTTGCACCTAAGTCATGAATCCCATCAGCAGCAGCAGCAGCAGCATCAGATTGACTGACATC
AACCAAAGGTTTCTTCGGACTTATATCTCCATCCAAAGCTTTCAGCTTCCTCTTCTTTCTCGTCTTCTCACCTACTGGAGTTTCCA
AAACTTCTTCAGGAGTCTGGTTCTTGTTATACCCATCTAAAAGCAGAGAATCAGATGCAATCTCCTTGTTCTTCTCAAGCAACTGA
TCATGATTGGAAGGTTTCTTCCCACTCTTTCCACCGTCCGGACTTCTCAGCTTCCTCTTCTTTGTTGTCTTCTCAGCTACTTGAGT
TCCAAAATCTCGTTGAGGCGTAGTATATCCAAGTAAAGGTAGAGAATCAGTCGCAATCTGCTTGTTCTTCTTCTCAAGCAGCTCAT
GGTCTGAACACTTGTCATCAGCATCATCCATTAGCTCAGCCTTGTCAGATACAGAGACGGCGGCGGCATCGACAGAAACAAACCAG
CAGTTGCTACTGTCACCCTCGAAAGCCAGACTCAAACACATAAAATCGGGCAAGTGATAATCTAAAAGGAGACCCTTTTTATTCTG
ATGTTCAACCTTAACCGCAGTGACACTGATTTCTCCAATATTGGGGAAACAGTAAAGGTGCTCCTTGCATAGTTTCTCTTTGAACT
CGGAGACGGTTTCATTGTTGTCAACGGGAAGCAAGAGATGGGTGTCTAGATTCGTATCTACATACACGCAGTTGATCTCCGCTGAT
TCGGTTTCCGCCATTGTCAGTCCACAAGTTCAGGTACGACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868496 CIP4.1 [Arabidopsis lyrata subsp. lyrata]3013e-025
XP_002894557 hypothetical protein ARALYDRAFT_337696 [Arabidopsis lyrata subsp. lyrata]2753e-022
BAB32952 COP1-interacting protein 4.1 [Arabidopsis thaliana]2191e-015
NP_174298 COP1-interacting protein-like protein [Arabidopsis thaliana]2191e-015
NP_567201 COP1-interacting protein 4.1 [Arabidopsis thaliana]2191e-015

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C5U4 COP1-interacting protein 4.12197e-016
Q9C8R5 Putative uncharacterized protein T1P2.172197e-016
B3H4H7 Uncharacterized protein At2g01800.32171e-015
B3H6U0 Uncharacterized protein At2g01800.22171e-015
Q9ZUA8 COP1-interacting protein-related2171e-015

Arabidopsis top hits (Blast detail)Scoree value
AT4G00580.1 COP1-interacting protein-related2258e-019
AT1G30060.1 COP1-interacting protein-related2194e-018
AT4G00930.1 CIP4.12194e-018
AT2G01800.1 COP1-interacting protein-related2177e-018
AT2G01800.2 COP1-interacting protein-related2177e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information