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Information for unigene UN43714
| FASTA Sequence |
| Unigene ID: UN43714 | Length: 959 |
SSR | | CGATGATAGGCCATATTCTAAAGATTACCAACGTGGAAACTGTGCATCCTTGTGTTCTCTCTTACACTTACTGATCATCCATCTTT
GTTACTTTCTATCATCTATGTACAAAGAACGTTTGCATACAAAGATACATCTACCAGATGTTCTGGATGATGATGATGATGATACA
TTACATATTGGCTACAACAGAAGGGATCTCTGCCTCCACTTCAGTTTCTCCTTCAGATCCTTCTTTGGTTATCTGAGGAGAATCCT
TGGGCTTGGTTTCAGAGAGATAGAGAGACAAAGCTCCTTCACCACGGAGAATCTTAGCTCCAGAGCCTCTACGCCCTTCTCCTTCA
ACTGCTTCTTCATCCACCACAACCGCCTCTATCATATCCTTCCCTGTACCCTCCTCCGGTATTTCGTACATAGAGTCCATAAGTAT
GCTTTCTAACAGAGCTCTTAAACCACGAGCTCCCGTGTTTTTGGTTATTGCTTTTCTAGCTATTAGCCGCAGCGCTGCTTCCGTGA
AATGCAGCTTTACACTATTCATCTGATACATCTTTTTGTATTGCTTTCCAAGTGCGTTCTTTGGCTCCGTCAGCACCTGCATAAGT
TGGTTCTCGGTGAGAGCAGACAAGCTGACGAGAACCGGAAACCTTCCAACAAACTCAGGTATTAAACCATAAGCAATCAGGTCACT
GCCTTCCACAGTTTCCATCAGGTTTGATGCAACAGCGGCGTTTGTAACCCCACCCGCCCTCATGTTAGCACGCACTGGAGCTCCAA
ACCCTATTGAAGAATCATGACGCCTCTCTGAGATGGTCTTCTCGATGTCTACAAAAGCACCACCACATATGAAGAGTATATCTTTT
GTATCTATCTGGATATTGTCGCCTCTTGGGTGCTTTCTAGCTCCCTTCTCAGGTACATTGACGATAGTTCCTTCCAGCATTTTAAG
CAATGCTTGTTGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568792 CLP protease regulatory subunit X [Arabidopsis thaliana] | 1242 | 2e-134 |
| AAB88706 CLP protease regulatory subunit CLPX [Arabidopsis thaliana] | 1234 | 2e-133 |
| XP_002864237 hypothetical protein ARALYDRAFT_918413 [Arabidopsis lyrata subsp. lyrata] | 1234 | 2e-133 |
| XP_002516670 ATP-dependent clp protease ATP-binding subunit clpx, putative [Ricinus communis] | 1019 | 2e-108 |
| XP_002272792 PREDICTED: hypothetical protein [Vitis vinifera] | 1011 | 1e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B0KJG7 ATP-dependent Clp protease ATP-binding subunit clpX | 538 | 4e-054 |
| A5W634 ATP-dependent Clp protease ATP-binding subunit clpX | 537 | 5e-054 |
| Q88KI9 ATP-dependent Clp protease ATP-binding subunit clpX | 537 | 5e-054 |
| Q11J59 ATP-dependent Clp protease ATP-binding subunit clpX | 533 | 2e-053 |
| B1J693 ATP-dependent Clp protease ATP-binding subunit clpX | 532 | 2e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FK07 ATP-dependent Clp protease regulatory subunit CLPX | 1242 | 2e-134 |
| O48566 CLP protease regulatory subunit CLPX | 1234 | 1e-133 |
| B9RSF1 ATP-dependent clp protease ATP-binding subunit clpx, putative | 1019 | 1e-108 |
| A5BYR3 Putative uncharacterized protein | 1007 | 3e-107 |
| B9S1U1 ATP-dependent clp protease ATP-binding subunit clpx, putative | 964 | 3e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G53350.1 CLPX; ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | 1243 | 7e-137 |
| AT1G33360.1 ATP-dependent Clp protease ATP-binding subunit ClpX, putative | 889 | 7e-096 |
| AT5G49840.1 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding | 796 | 5e-085 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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