RadishBase

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Information for unigene UN43788

FASTA Sequence

Unigene ID: UN43788	Length: 942	SSR
ACAAATTTGGGGACGTTTTTTTTTTCCTTCAATATGAATATTATTAACTTTAATTTTATTAAATTTTGGGGACGTTTATATATATA ATTTTTCCCCAAATTTTTGTGGGTAATAGACCAATGCTTCACTAGCCTATACACTCAGGACCGGCCATGCTTCACGCTAGTATAAA AAAAACCGCGCACATGAATCAAAATTCAACATACTTTCTTATCTTTGCTCTTCCTTGAAGAATGATCATCCTTTCTACGCTTTCCA TTTTCCTTTTTCTGTAAATCCATCAATCAACTAATGAATAAAGCCAACAGTGAAGAAGAGTAACTAAGAAAAATAGCAAAAAAACT GATAAAACTTACAGTCATCCATCTACAACGTAAAGCAACATCTCTAACAGTTTTATCCTTCATTTTCATCGAAATCTTGGCATAAC GAACAATTGTAGGCTCTGACGCGTACCTGTATATATATATATATAAACACCAATCATTAACAAGACTCATACAAAAAAAAAACTCC TAGCCATATATATATATATATACCACTCATACTCCAATCAAATCACAATACATATCATTTAAACCTGAAACTACATTAAAAAAAAA GAAAAAACTTTAAACACATCCAAAAGACCACTGCTAACAATTCAGACACAGCTAAAGTCAGATACTTTCACATCAAAAGCGAAGAA GCGATAGAAAGGAGGATACTTTGCGAGCAAATCTTCCAATAGAGATTGCTCCTCATGAGTCCAATCCACAGAGATCCCTGGATTAT GCCTCAACGCGCTTATCGTCTCTGAATTATCCGCCGCCGCCTTATTACCACCGTTATCCACAGCACCATTCGTAGCCACCGCCGCC GCCGGAGATGAAGACGTCACCTTCTGAGCCGCCGACGTACCTTCCTGATTGTTCCCCGGCGGATTCGCACTCGCCGCCATAA

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_187413 uncharacterized protein [Arabidopsis thaliana]	287	1e-023
NP_001030658 uncharacterized protein [Arabidopsis thaliana]	287	1e-023
NP_001030657 uncharacterized protein [Arabidopsis thaliana]	287	1e-023
AAF02161 unknown protein, 3' partial [Arabidopsis thaliana]	287	1e-023
NP_001189835 uncharacterized protein [Arabidopsis thaliana]	287	1e-023

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q2V3X6 Putative uncharacterized protein At3g07565.3	287	8e-024
Q2V3X7 Putative uncharacterized protein At3g07565.2	287	8e-024
Q84WV3 Putative uncharacterized protein At3g07565	287	8e-024
Q9SRQ9 F21O3.28 protein (Fragment)	287	8e-024
B9SF08 Putative uncharacterized protein	222	3e-016

Arabidopsis top hits (Blast detail)	Score	e value
AT3G07565.1 DNA binding	296	4e-027
AT3G07565.2 DNA binding	296	4e-027
AT3G07565.3 DNA binding	296	4e-027
AT1G10820.1 unknown protein	119	1e-006
AT1G10820.2 unknown protein	119	1e-006

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	2			100%

Unigene Members	Member information