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Information for unigene UN43790
| FASTA Sequence |
| Unigene ID: UN43790 | Length: 826 |
SSR | | ACAATTTTCCGATATTTTTTTCATTATAACTAAGAATTGGAACAAGACTGATGAATTACAAACTTACAACTTAAAAAGCCTAAGTA
AATTAATGCAAAAAGCTGAGATTAAATAACATTAATCAGAACCAATTCCCTTTTTTCTAGTTTTGACTATATAGCCTATAAATCTC
ATCATGTAGAGCCCTGACCAGACCCGATCCGAATACCAGAAGCAACAGGGTCAGATGCAAACAGTTATCATGAACTGTTCACCTAA
GACGAGCCTCTGTTTTTTCTTTGTCTTGTCGCAATCTCGAAACCATTGATACCTGGGCGAGAAACTCTTGATCAGGTTGCTTACTG
GAATCAAGTTTCTTAATGGCAGCAGCCTTGCCGCTTCTAAGAACACCGTAGAACACTCTTCCATAAGAGCCCTCACCAATCAAGGA
CTTTGAACCATAGTTATCGGTTATGTCCTTCAGCTCATCAGCTGGAATGGCCGGCACAGAGATGGGCTGCATCTGAATGACTGGCG
TGTTCTTTGGCGGGTCTGTCCTTGCATGGTGAACTCCACCGTGACCTGCTGCGCCGTAGACAGGCTTAGGACCAGTTTCAGCAACT
CTACGAAAATCGTCACCACCACAACAACCAAAGCAGCTCATTACGCTCTTCTCTCACAACACAAACCACACTTTTTCCAAAACAAA
AGAGAGAGAGAGAAGACTGAGTGTGGTTGAATCTTCTTCCGATGAAAGGAGAAGAAGAAGGGTAGGGAGGATTTTGACTATATCTT
CTTATACGTATGGTTGGTGGCGAAGCTTTAGGCTTAAGAAGGCAGAGGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002883060 hypothetical protein ARALYDRAFT_479217 [Arabidopsis lyrata subsp. lyrata] | 558 | 4e-055 |
| NP_188367 putative serine/threonine protein kinase [Arabidopsis thaliana] | 544 | 1e-053 |
| XP_002891418 predicted protein [Arabidopsis lyrata subsp. lyrata] | 499 | 2e-048 |
| NP_175255 serine/threonine protein kinase [Arabidopsis thaliana] | 498 | 3e-048 |
| AAF79541 F21D18.6 [Arabidopsis thaliana] | 498 | 3e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41328 Pto-interacting protein 1 | 402 | 2e-038 |
| O80719 Probable receptor-like protein kinase At2g47060 | 342 | 2e-031 |
| P93749 Probable protein kinase At2g41970 | 208 | 6e-016 |
| C0LGG8 Probable LRR receptor-like serine/threonine-protein kinase At1g53430 | 125 | 3e-006 |
| C0LGG9 Probable LRR receptor-like serine/threonine-protein kinase At1g53440 | 125 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUT0 Putative uncharacterized protein At3g17410 | 544 | 1e-053 |
| Q9LNH4 F21D18.6 | 498 | 2e-048 |
| Q93Y19 Similar to Pto kinase interactor 1 | 492 | 1e-047 |
| Q9SX57 F11A17.22 protein | 433 | 8e-041 |
| B2CZJ8 Pto kinase interactor 1 | 404 | 2e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17410.1 serine/threonine protein kinase, putative | 544 | 6e-056 |
| AT1G48210.1 serine/threonine protein kinase, putative | 498 | 1e-050 |
| AT1G48210.2 serine/threonine protein kinase, putative | 498 | 1e-050 |
| AT1G48220.1 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 433 | 5e-043 |
| AT2G47060.1 serine/threonine protein kinase, putative | 342 | 2e-032 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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