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Information for unigene UN43800
| FASTA Sequence |
| Unigene ID: UN43800 | Length: 573 |
SSR | | CGTCACACAAATCCATGTAATATATGATCCGGACTCTTCAATTACAGTTATTCCATTAGTCATATTCCTTCCGAGAGTCTATATAT
GGGTACGGAAGAAGGTAGATAAACATCACCACAAAGCACACTGTTCAACAACTTTCAGAATATGAAATGCTATCTCAAACCCTATT
GGGAATAGGTCCAACCGAATGTAGTAGAGAGGCTCTCTCTAACTTGAGCGAATAAGGCCGTGCAAGTAAGCCCCAGTCATTACGAG
TGACACCATCGATACAACTCCTGCCGGGACTACTTTCCTCGTCCTTAAGTAACGCGATCCCATCATTCCTGTCAACGCTGCCGACC
ACACTATACCGATAGAGGATGCCAATATAGGATTTTCTGGAAGCTCCTTGTAAACATAATAGAACAATGCAGCTGATCCTCCTCCT
GCGACTACTGAGATTTTGCTTCCGCGTTTCAGGTAACCCATCAACCCACCAACTCCAAGGAGAGAAGCATAAACAAGAGTGAACTT
CTGAGACATCGATGACTCCATCTTCTTCTTCTTCTTCTTCTTCTCTGTGTTCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002880770 hypothetical protein ARALYDRAFT_481481 [Arabidopsis lyrata subsp. lyrata] | 486 | 3e-047 |
| NP_180192 Transmembrane proteins 14C [Arabidopsis thaliana] | 485 | 4e-047 |
| XP_002516175 transmembrane protein 14, putative [Ricinus communis] | 377 | 1e-034 |
| XP_002309449 predicted protein [Populus trichocarpa] | 357 | 3e-032 |
| ABR17562 unknown [Picea sitchensis] | 349 | 3e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64847 UPF0136 membrane protein At2g26240 | 485 | 2e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| B9RR06 Transmembrane protein 14, putative | 377 | 1e-034 |
| B9HCN6 Predicted protein | 357 | 2e-032 |
| B8LPI2 Putative uncharacterized protein | 349 | 2e-031 |
| Q8LC37 Putative uncharacterized protein | 344 | 7e-031 |
| Q94A32 AT3g43520/T18D12_90 | 344 | 7e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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