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Information for unigene UN43803

FASTA Sequence
Unigene ID: UN43803Length: 1107 SSR 
AAATTCGGGAAGGAGTATATATATATATTCATCATGTAATGGACATGAACAACATGGAAAAAACTCAATATAAGAAACAACTTGAG
CAGTCTTAACACTTCAGAAGAAACTCTTGTAGAAAGATCACACGAATACAGACAGAAACAAGCACACACTGAGTCGGGTAAGAAAC
TTTAATAGATAATGGCAATAGAGAGTAGTGATGGGTCCCTTTCCTGTTCATCTCATCACTTCAGTACATTGTACAAGTATGCAGCG
ATACCCAGAACGATACACAACAGAACAATATCGATGCAGAAGTTCCTGCTTGATCTCAGCTGGTTCACAGTATCTTTGAGTCTAGC
ATTGGTGTTCTTAAGATCCGAGGTTGCTCTGTCCACCTTTGAGTCGATTTCATCCATCAGAGGAACTTGCCGATCCAGCTCCTCGT
TCATATCAGATGCCATGTTCTTCAAAGCATCTAGACCTTTGGAGATCATGTCCAGACCTTGGTCCTGTTAAATAGTAGACAAAAGT
CCTATAGATACCATACAACCCATAGCTTAAGTGAAGAAACATGTGGAATGCAACGAGATTAGAACATCAATTGCCTGCTTAATTTT
GCGCATCTCAAACTCCTGTTTGAACTGGCTGGATTCATGCGACTCTTGAAAGTAATCATCATCAAAACGCCCATCTGAATCAAACT
TGATATCAGGACGAGAGGTTGTAGAAGGAGCCCAAGCACTAGTAGTGCTTTTAGGACCACCCGCTGTCCCATCAGGTATAGCTTCG
ATCCTCGCCGGAAGCGCAAGTACCAAATCGTTTCTCAGCGTTCATCGCAACAGCAGAAGCTCTGTTCTTCTCCTTGGTAACAATTT
CAGCTTTCTCGAGAGCTGTCTCGATTTGGGTCTCGAAAGCTCCGTAGAGACGAGCGAAAGCGTCATCGCCGGAGATGTTGGACTCG
CGCTGTTTGTCGACGTCGTACTTGTCGTACTTCTTGCAGATCGTGTCAACTCTGGTCAGAATGTCGATCACTGTCATCTTCTCTCA
CCAAGGAACTCCCGGATCGCTAATTAAGGACAGAAACTCTCTGATTCGAAGAAGACTTCTCTAGTTTGTGTCCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566354 syntaxin-71 [Arabidopsis thaliana]4295e-040
XP_002882636 hypothetical protein ARALYDRAFT_897138 [Arabidopsis lyrata subsp. lyrata]4295e-040
XP_002519551 syntaxin, putative [Ricinus communis]4162e-038
XP_002280272 PREDICTED: hypothetical protein [Vitis vinifera]4091e-037
ADE77137 unknown [Picea sitchensis]4081e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q9SF29 Syntaxin-714292e-041
Q94KK6 Syntaxin-723494e-032
Q94KK5 Syntaxin-733388e-031

TrEMBL top hits (Blast detail)Scoree value
Q2HIU8 At3g097404294e-040
B9S0N2 Syntaxin, putative4161e-038
D5AC68 Putative uncharacterized protein4081e-037
C6TKX1 Putative uncharacterized protein4034e-037
C0L7E7 Syntaxin-714016e-037

Arabidopsis top hits (Blast detail)Scoree value
AT3G09740.1 SYP71 (SYNTAXIN OF PLANTS 71); protein transporter4302e-042
AT3G45280.1 SYP72 (SYNTAXIN OF PLANTS 72); protein transporter3503e-033
AT3G61450.1 SYP73 (SYNTAXIN OF PLANTS 73); protein transporter3395e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information