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Information for unigene UN43819

FASTA Sequence
Unigene ID: UN43819Length: 428 SSR 
AAATTGAAAACATGAGTTGAACCACTGTCTAATAACTCTGGTCACTACCAATCACTTGGGTGTACTTAAGCTCTCTCTCTCTCAAT
CTCACTCTCTAGTCTCATCACTTGACAAAGTAGAGCTTGCCCATGACATGAAGGACAGCGACGAAAGCAATAAAACCAATACTCAT
GACAAGGACAACATTAGGAGAGATCTTGAGACCCGGTGCGTCATCGGTGTAGAACTGAAGCATAGACCCTGCTGCACCACCACCAC
CAGAGGCTCCTCCACTTCCGCTAGGCTTCCTCCTACGCATGCTAGCAGCAGCAGCTGCACTTCCTCTCTGTGGAGCTCCACTTCCC
ACCATCCTTCTCTTCTCTTCTCTTGTTTAGCTAACTGAATCGCCTTCTGATGTCGACGATGAACGATGACGCGGAGATGTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_182033 protein transport protein sec61 subunit beta [Arabidopsis thaliana]3642e-033
XP_002881995 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3642e-033
NP_191613 Preprotein translocase Sec, Sec61-beta subunit protein [Arabidopsis thaliana]3382e-030
BAC42429 putative transport protein subunit [Arabidopsis thaliana]3355e-030
XP_002878341 SEC61 beta [Arabidopsis lyrata subsp. lyrata]3321e-029

Swiss-Prot top hits (Blast detail)Scoree value
P38389 Protein transport protein Sec61 subunit beta3641e-034
P60467 Protein transport protein Sec61 subunit beta1491e-009
P60468 Protein transport protein Sec61 subunit beta1491e-009
Q9CQS8 Protein transport protein Sec61 subunit beta1491e-009
Q5RB31 Protein transport protein Sec61 subunit beta1491e-009

TrEMBL top hits (Blast detail)Scoree value
B9DGF7 AT2G45070 protein3641e-033
Q9M206 Transport protein subunit-like3381e-030
Q8GY93 Putative transport protein subunit3353e-030
A9P911 Predicted protein3246e-029
A9P839 Putative uncharacterized protein3174e-028

Arabidopsis top hits (Blast detail)Scoree value
AT2G45070.1 SEC61 BETA; protein transporter3651e-035
AT2G45070.2 SEC61 BETA; protein transporter3651e-035
AT2G45070.3 SEC61 BETA; protein transporter3651e-035
AT2G45070.4 SEC61 BETA; protein transporter3651e-035
AT3G60540.1 sec61beta family protein3471e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

Unigene MembersMember information