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Information for unigene UN43820

FASTA Sequence
Unigene ID: UN43820Length: 925 SSR 
ACCAAAAAGAAAAACTATGTTTTGCTTCTCATGTCGGGCAAGGATTAATAACTTAAAGCCGCGACAGGTAATTATTCATCAAATAC
AAAACACTTCCACGACTCCCATCTAGCTATGATCTTCATATAAACTGTAATATAAAACACCATTTTGTTCAAAATACAAAACGCAT
TTTTATATATATCTAGTAAAAAGAAAAAGTTGATCACCATCAAGAATATTCATCAAGAGCACATCGATCGCGCCGATTTATTTGAA
GTCATCGAGAGAGATATTCTCGACTGAGCCAAAACCCTCGAATGATCCAACCTTGGAGTAATAATTATTAGTCCTCATCGTGAGTC
CACCCAAAAAATCGAGAGGCGTATCGTTGGAGGTTAGAGCCGTCGTGTCGTAGACGAAAGACGTGGTAGTGGATGTGGCGGTGATG
TCGTCGATGATGGGATAATAGAAAGAACATTTTCCGTTGTCGCTGTTGTAGTGATGATTATAATCTTGGATGAGAAGATCGTTAAC
CACAGTGTTTTCAATCTTTTTTAAGTCTGTGTAAATGTCGTCTTCTTCAGCCTTGTTAAGTTTTCTTCTTCTTCTTCTTCTGATGC
CTTTCTTGCTTGTATCACGTAATTTTTACGGTAGAGGTTTTGGTAGACCATGATGAAGTCACCTTGCTGCAAACCATGAGCATTCA
CAAAGTCCCCTGTGTTTTCTAGCACGTACATTCTGCTATTGTTGTTTGGACAGTACCTGTACTTGAAGGTCCAAACGTGAAGACCA
TCCAAATCTTCCATTTTTATAGGTATCCCTTCCTTGGATTCCAACGCCGGCAAGTGAGCCTCCGCAGCTTTCTTAGGGAGTATCAT
TCGGCGGAGGGAACTGACGTCACTATTCTTCAGTTCCTTCTGGAAGAGAAATCTTAGTCTTCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADO16344 fusca 3 [Brassica napus]5657e-056
ADO16345 fusca 3 [Brassica napus]5657e-056
AAS79559 transcriptional regulator [Arabidopsis thaliana]5432e-053
NP_566799 B3 domain-containing transcription factor FUS3 [Arabidopsis thaliana]5432e-053
AAC35246 FUSCA3 [Arabidopsis thaliana]5432e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q9LW31 B3 domain-containing transcription factor FUS35431e-054
Q01593 B3 domain-containing transcription factor ABI33233e-029
P26307 Regulatory protein viviparous-13162e-028
A4LBC0 B3 domain-containing protein LFL13135e-028
P37398 B3 domain-containing protein VP13091e-027

TrEMBL top hits (Blast detail)Scoree value
B9RH04 Putative uncharacterized protein4921e-047
Q2HUJ5 Transcriptional factor B34615e-044
B9N0V4 Predicted protein3532e-031
B1V8R3 FUSCA33442e-030
O80394 Transcription factor Vp13397e-030

Arabidopsis top hits (Blast detail)Scoree value
AT3G26790.1 FUS3 (FUSCA 3); DNA binding / transcription activator/ transcription factor5439e-056
AT3G24650.1 ABI3 (ABA INSENSITIVE 3); DNA binding / basal transcription repressor/ transcription activator/ transcription factor3233e-030
AT1G28300.1 LEC2 (LEAFY COTYLEDON 2); DNA binding / transcription factor2982e-027
AT2G30470.1 HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor2141e-017
AT4G32010.1 HSL1 (HSI2-LIKE 1); transcription factor2061e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  100%

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