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Information for unigene UN43871
| FASTA Sequence |
| Unigene ID: UN43871 | Length: 662 |
SSR | | CAGTTTTAAAATCGAATATTACATACAGTGTTTATAATCCAGTTTTGTTGGTGAAAGCCAACACATACATACGCGTAGAACACAAT
GAAGGAACTAACTACAACGTGATGACAATAATGCGATTTAACATCTTCAGACTCCAAAGAGGTGAAGGAAGCTCTCTTGGTTTCGG
AATTCTTTAACCCGACTTGAAGAGCAGCACAGCTTTTTGGTCGAGGTAAAAGTAAACGAAATGGTTTGTCTCGTGAGTTACGTAAG
AACCAAAGTTGCGACCAACAATGCAATGCCAAGTAGCACCATGTTTCTTGTCAAACTCCTTTTTTATATTCTCAGCTATATCCTTC
TCCACACTGTTATTCTCAAATGCGGCGATAGCGATATCGATAGCCTCCTTCTGCATAGCCTCTTTTATATCAGCACTCTTTACTAC
AGCTCGCTTCCCCGCCGCCGCCGCTTGAGGAACTTCAACACTAGATCTCCGATCATCGGGATTCGTTTGCGCCGGTGCTCCTCCTC
CGTTCACACTCTTCTTTATCCTCCCCTCACTCATTCTTTTTTCTTTCGTCTGTGATTTTCTTTTTTATTCTCTTGAAATCAGATTT
GCTGAAGATATAAGCGAAGAAAAAAAAAGGAAAAGACTAAAGAAGAAGAAGAAGCTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002870199 At4g15930 [Arabidopsis lyrata subsp. lyrata] | 512 | 5e-050 |
| NP_193328 dynein light chain LC8-type [Arabidopsis thaliana] | 510 | 8e-050 |
| CAB46031 dynein light chain like protein [Arabidopsis thaliana] | 433 | 7e-041 |
| AAL57365 neuronal nitric oxide synthase protein inhibitor [Arabidopsis thaliana] | 430 | 2e-040 |
| XP_002328627 predicted protein [Populus trichocarpa] | 423 | 1e-039 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39580 Dynein 8 kDa light chain, flagellar outer arm | 328 | 5e-030 |
| Q24117 Dynein light chain 1, cytoplasmic | 324 | 1e-029 |
| Q3MHR3 Dynein light chain 2, cytoplasmic | 323 | 2e-029 |
| O96860 Dynein light chain 2, cytoplasmic | 323 | 2e-029 |
| Q96FJ2 Dynein light chain 2, cytoplasmic | 323 | 2e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84VW0 At4g15930 | 510 | 6e-050 |
| O23442 Dynein light chain like protein | 433 | 5e-041 |
| Q8W1X1 Neuronal nitric oxide synthase protein inhibitor | 430 | 1e-040 |
| A9P9B8 Predicted protein | 423 | 7e-040 |
| A5BC89 Putative uncharacterized protein | 418 | 3e-039 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G15930.1 microtubule motor | 511 | 3e-052 |
| AT5G20110.1 dynein light chain, putative | 192 | 3e-015 |
| AT4G27360.1 dynein light chain, putative | 180 | 7e-014 |
| AT1G23220.1 dynein light chain type 1 family protein | 179 | 9e-014 |
| AT1G52240.2 ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | 172 | 6e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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