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Information for unigene UN43892

FASTA Sequence
Unigene ID: UN43892Length: 833 SSR 
GGTCAAAATCCGGTTTGGTTCTTGGTTAGACAAGAACATAAAACCAAAAAGTGTATATGAACTTCGGATTCCGGCAATGTTTCTCT
TCTCTGAGTTATTGGGAAGTGCGAGTTTGACATTCCATAGGTAAAAGTGAAAAAGATGGAGACAACAAGTCAAAGAAAACATTTAA
ATGTGTGATGATTCGACATTTTCAAGTGTCATCATCTTCATATTACAATAGAGGGGGCTTCTCTTGGTCGTTGCATCAAGCCTTGT
CGTCATGGAACCACCACCTCGTCTCCTTAGGAGACCTCCCGTTCTTACAATTCTTGACGTAACGATCATTATCTGCGGGGCGTTCC
TTTGCAGGTGAACTTGATAGCATGGAGAGAATGCTGATGCAGACCGAACTCACAATCATTGCTGGTGACCACGAGTCATATAGAAT
ATCCAAACAAATATGTCCATTGCTGTAAATATGTGGATGTGACGGTGCCGGAGGAACAAAAACTACCTGGGGGGCTTCCATAGGGT
AATTAACGGGAAATTCAACCTGAAGCTGGTAAGTCTCGTTCGCGTAGAGCGTCCCCGGAGCTCCGGTCACATCGATTGTCCATTTT
TGAAGATTATCGGTAACTTTGTGCCTAAATCCAGTGGGAGGATTTAATTGCCACTCGGTAAGCTCTTTCTGCAACCTATTGCACGC
GATCTTGCTTAAAGCCTACGCACGCATATGATTCCACGATTTTCAGATTTCATCATCAAAAGTTTTATATATATAAGAGAGAGAAT
TAACGAATCCGTGAAGAAATGGAAGACATGCGAGAGAGAGAGAGAGAGACCTTGCGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564493 ubiquitin-conjugating enzyme 15 [Arabidopsis thaliana]7923e-082
CAA48378 ubiquitin-conjugating enzyme [Arabidopsis thaliana]7888e-082
NP_568619 putative ubiquitin-conjugating enzyme E2 18 [Arabidopsis thaliana]7645e-079
XP_002310827 predicted protein [Populus trichocarpa]7483e-077
XP_002280882 PREDICTED: hypothetical protein [Vitis vinifera]7466e-077

Swiss-Prot top hits (Blast detail)Scoree value
P42743 Ubiquitin-conjugating enzyme 157921e-083
Q9FMM0 Probable ubiquitin-conjugating enzyme E2 187642e-080
Q9FWT2 Probable ubiquitin-conjugating enzyme E2 167184e-075
O23239 Probable ubiquitin-conjugating enzyme E2 176593e-068
Q55EY8 Probable ubiquitin-conjugating enzyme E2 W4211e-040

TrEMBL top hits (Blast detail)Scoree value
B9HFA8 Ubiquitin carrier protein7482e-077
A5AEM8 Ubiquitin carrier protein7464e-077
C6SVP6 Ubiquitin carrier protein7411e-076
A6MUS6 Ubiquitin carrier protein7366e-076
B9MXK5 Ubiquitin carrier protein7366e-076

Arabidopsis top hits (Blast detail)Scoree value
AT1G45050.1 ATUBC2-1; ubiquitin-protein ligase7938e-085
AT5G42990.1 UBC18 (ubiquitin-conjugating enzyme 18); small conjugating protein ligase/ ubiquitin-protein ligase7651e-081
AT1G75440.1 UBC16 (ubiquitin-conjugating enzyme 16); small conjugating protein ligase/ ubiquitin-protein ligase7193e-076
AT4G36410.1 UBC17 (UBIQUITIN-CONJUGATING ENZYME 17); small conjugating protein ligase/ ubiquitin-protein ligase6602e-069
AT3G08690.1 UBC11 (UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase2051e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

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