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Information for unigene UN43893

FASTA Sequence
Unigene ID: UN43893Length: 628 SSR 
CAGAACTTAAAACCATGGAATAGAAAAAGTGTATAACTTTCAGTTTAGGACATAAATCTCGAATCAAAACAAGCAATAAACATTTC
AAGAACAGCAAGTCTTTCGCCCCTAACTTCAAAACAAAAACAGCCAATCTAAAGATTTCTCTTTTGATTCGACTGATAACAACAAC
AACAACAACCTCCTCCTCAGAACCTTCTTGGTGGCCTGCTGAAAGAAGGTGCGGCCTGTGCCTCGACTTCAGAGAAGCCATGAGCG
CCAGACATTCCAAGGGAAGCAAGCATCTCCAGAGTCTCTTTATCGACCTTGATCACATCGGTCTTGATGGCAGACTCATCGGGAAC
AAAGTCCATGCGGCGCTCACGCTCTTCCTCTTGAAGCTTGAGCGAGATGCCACGGACCGGTCCCTTCTGGATACGTTTCATCAAAT
GGGTGGAGAATCCAGCGATCTTGTTGCGGAGACGCTTGGAAGGGATGATTGCGACTTCTTCCAGGATCTTCTTGTTGGTGTGGAAG
TCGAGTGTCATGCGAGAGTAGTACTTCTCGATGACTTGACGAGATGATTTCTTCACGGTCTTGGTTCGGACACGTCCCATCTTTTC
GGTTATCTGCTACTTACCTGCAAAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882688 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]5878e-059
XP_002871114 40S ribosomal protein S17 [Arabidopsis lyrata subsp. lyrata]5851e-058
NP_178520 40S ribosomal protein S17-1 [Arabidopsis thaliana]5743e-057
NP_565320 40S ribosomal protein S17-2 [Arabidopsis thaliana]5734e-057
NP_196100 40S ribosomal protein S17-4 [Arabidopsis thaliana]5734e-057

Swiss-Prot top hits (Blast detail)Scoree value
P49205 40S ribosomal protein S17-15741e-058
Q9SJ36 40S ribosomal protein S17-25732e-058
Q9LZ17 40S ribosomal protein S17-45732e-058
Q9SQZ1 40S ribosomal protein S17-35713e-058
P49215 40S ribosomal protein S175401e-054

TrEMBL top hits (Blast detail)Scoree value
B9DGM0 AT5G04800 protein5732e-057
A5BHY1 Putative uncharacterized protein5454e-054
Q3HRX4 40S ribosomal protein S17-like protein5421e-053
A9NP61 Putative uncharacterized protein5383e-053
A9PA24 Putative uncharacterized protein5348e-053

Arabidopsis top hits (Blast detail)Scoree value
AT2G04390.1 40S ribosomal protein S17 (RPS17A)5751e-059
AT2G05220.1 40S ribosomal protein S17 (RPS17B)5741e-059
AT2G05220.2 40S ribosomal protein S17 (RPS17B)5741e-059
AT5G04800.1 40S ribosomal protein S17 (RPS17D)5741e-059
AT5G04800.2 40S ribosomal protein S17 (RPS17D)5741e-059

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information