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Information for unigene UN43905
FASTA Sequence |
Unigene ID: UN43905 | Length: 423 |
SSR | | TTTTGAATCATGTTCAACAAGAGAACAGAGCAGATTTTTTTTCTTAACTTAGAAAAAAAATGTAGAGACCCCACTAAACCTAGCTG
ACAACCGAGAGCTAATAAGAACTTCTGATATGAGAAAAATCATTGCCAACAAAAACAGATCGAGCATCCACCTCCTCTTTGCCTGC
TTGATCTGCTGCTACAGTACCAGCATCTTGAGGTCCCATATCCTTCTCAACCTTGGCCTGCATCTCACGAAGAGCAGCAGCTTCGT
CCTCAATCTCCTTCAATCGCTTCTTCATCTCATCCAACTCCTTAGCGGCATCATCATCAGCGGCAGTCATGTCCATGTCTCCATCC
ATCTCTCCGACGTCCGGAATCTCTCCGCCGTATACCTCGTGCTCCTTTTCCTCCATCGCCTCTCTCCCTCTCTCTCTCT
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GenBank top hits (Blast detail) | Score | e value |
ACU19123 unknown [Glycine max] | 345 | 3e-031 |
XP_002306300 predicted protein [Populus trichocarpa] | 343 | 6e-031 |
ACU24426 unknown [Glycine max] | 343 | 6e-031 |
XP_002531675 poly-A binding protein, putative [Ricinus communis] | 337 | 3e-030 |
CBI25873 unnamed protein product [Vitis vinifera] | 333 | 8e-030 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9DDY9 Polyadenylate-binding protein 2-A | 140 | 7e-009 |
Q7ZXB8 Polyadenylate-binding protein 2-B | 140 | 7e-009 |
Q6NVP7 Polyadenylate-binding protein 2 | 139 | 9e-009 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9FJN9 Poly(A)-binding protein II-like | 394 | 5e-037 |
C6TBC1 Putative uncharacterized protein (Fragment) | 345 | 2e-031 |
B9H4R7 Predicted protein | 343 | 4e-031 |
C6TND4 Putative uncharacterized protein (Fragment) | 343 | 4e-031 |
B9T0A6 Poly-A binding protein, putative | 337 | 2e-030 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G65260.1 polyadenylate-binding protein family protein / PABP family protein | 394 | 4e-039 |
AT5G10350.2 polyadenylate-binding protein family protein / PABP family protein | 327 | 3e-031 |
AT5G10350.1 polyadenylate-binding protein family protein / PABP family protein | 327 | 3e-031 |
AT5G51120.1 PABN1 (POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding / protein binding | 202 | 8e-017 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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