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Information for unigene UN43957

FASTA Sequence
Unigene ID: UN43957Length: 1146 SSR 
CCAAATCATCATGATAATAAACTCAAAATGTAAACCACAATCATAATATATTTTTTTTTGACATCAGCACAATCATAATTAAAAAA
ATCGGCAGCATGAGGAAAATAAATTGCAATGATAACAATAACAAAGGAAACACTTTGTGGAGAAAGATAGTTTTGTCTAAACGGAA
TGCAGAACGTCCACTTCTCGGAAACCCCCTAACGGAACCATATATTATTTGTAGGATTCGAACTGGTAACTGGATTGGCACTGCTT
GCGCTAACGTTTGTTGCCGGAGTACTGGAGGATTCGACAGGGATCTGCTGGTGGTGGTGGTGACGGTTATCATTCATGAACGGGAA
GCCCATTTGCTCAGCTGCATAATTCATTTGCTCAGGATGGTTCATCATCATCTCCGTAAACCACTGTTGTTGATTCTGGTTATGAC
TCAGATTCAGATTCAGAGGCTGCTCATAGTGTCCAACATGTGGAGCTGCATGATGACGAAACAGCTGCTGCTGCTGCTGCTGATGA
TGATGAGGCTGAATCGGAGCGGTTGCTGTCGGCACAATAGCCAACGTTCCAGCGGTTTCAGAAGGAGAAGCTGCAGCAGCGTTGGA
GGATTCACCAAGCTCCATACCACCAGAACTCCCCAAAATCTCGATCCTGCGGCTAACATCTTTAAGATATTGATCAATCATATAAC
CTAAATCATTAAGATCCATAATATTGAGGTTAAACATCCCCATGTTTCCGACCAAACATTGGAACATGACTTCAGTCATCTCCATC
TCCCTATTGTCTTTCCTCTGCTTCTTCAAATTGTCGGAGGCTTTGGCTATTCTTTGTCTGAGAAAGGTTTCTTGATCCACCATTTT
CTTGTTCTGGTCCATCTCTGGCAACTTCCGGAAATCTGAGATGATTCTTTGCACGCCGGAGTTTGAGGGCCATACCTCAGGATTGG
TGTCGTAGGGGCTGTAGATGATGGCACATGCGTTGATACCACATAGTGTTGAAAGCTCGTTCACTTTCTTGATCAAACCTTTCTTT
CTCTTTTTAAAGGTTGCTTTTCTGGAAGAATCGCTGGCAATGAAAGCAAGTTTCACTTTCTTCCTTGTCATGATGGATATTTTTTC
TTTGTTTTTGTTTGTTTGTTTGTTGTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199678 agamous-like MADS-box protein AGL80 [Arabidopsis thaliana]7315e-075
XP_002279507 PREDICTED: hypothetical protein [Vitis vinifera]6114e-061
XP_002329991 predicted protein [Populus trichocarpa]6025e-060
ACI05256 type I MADS box transcription factor [Petunia x hybrida]6016e-060
CAN65747 hypothetical protein VITISV_037765 [Vitis vinifera]5953e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9FJK3 Agamous-like MADS-box protein AGL809517e-102
Q7XJK8 MADS-box transcription factor PHERES 24841e-047
O80805 MADS-box transcription factor PHERES 14382e-042
Q7XJK6 Agamous-like MADS-box protein AGL363891e-036
Q7XJK5 Agamous-like MADS-box protein AGL903819e-036

TrEMBL top hits (Blast detail)Scoree value
B9N410 Predicted protein (Fragment)6023e-060
B6DT62 Type I MADS box transcription factor6014e-060
A5BJU9 Putative uncharacterized protein5952e-059
B9I7J4 Predicted protein5853e-058
B9S273 Mads box protein, putative5801e-057

Arabidopsis top hits (Blast detail)Scoree value
AT5G48670.1 AGL80 (AGAMOUS-LIKE 80); DNA binding / transcription factor9525e-103
AT1G65300.1 AGL38 (AGAMOUS-LIKE 38); DNA binding / transcription factor4849e-049
AT3G05860.1 MADS-box protein (AGL45)4803e-048
AT5G26630.1 MADS-box protein (AGL35)4571e-045
AT1G65330.1 PHE1 (PHERES1); DNA binding / transcription factor4382e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information