Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN43960

FASTA Sequence
Unigene ID: UN43960Length: 519 SSR 
CTAAAGCAATTATGGTCTATTTTTTTATTTTATTTTTTTGAAAAAGGGCTAATTATGGTCTATTTGTTTCATAATAAACAATATTT
CTGACATTATTTTTACGTGACAATATATGTGCCGTGACTCGAACGTTTTGTTTAAACTTACCGGAGACACCGGCGGTACAGTAAAC
GAGAACAAAAATCATTCCACCGAAAGCCCACGCAATCCCCAATATTCCTACACCGCCGCAATAAACTCCTCCCGCGTTTGCGTCGG
TCTGAGCTTTGTAGCCGATTACGGTGAGGACTGAGACGTAAAGGAAGAGAAGTGTCGCCACAAACTCAGCTATGACCGCTCTGTAG
AGCGACCACTTCCCAAGTTCCTCCATGTCTAACAAAGGCGCCGGAGGCGGATCAACGTAATCTCTCACCGCCGTTGCTCCCCTCTC
TTGCACCTCCAAGTCCTTTGCCATGGCCAAAGATGATGATGATGATGAGAGACAGAGAGAGCAAGAGATAGATGAGTTTTAATGTT
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866389 hypothetical protein ARALYDRAFT_919301 [Arabidopsis lyrata subsp. lyrata]4782e-046
NP_200874 putative aquaporin PIP2-4 [Arabidopsis thaliana]4665e-045
AAC17529 aquaporin 2 [Samanea saman]4461e-042
CAB45651 putative plasma membrane intrinsic protein [Pisum sativum]4414e-042
AAY22203 putative aquaporin [Phaseolus vulgaris]4352e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q9FF53 Probable aquaporin PIP2-44663e-046
P43286 Aquaporin PIP2-14082e-039
Q8GRT8 Aquaporin PIP2-44082e-039
Q9ATM6 Aquaporin PIP2-44045e-039
Q9ATM5 Aquaporin PIP2-64036e-039

TrEMBL top hits (Blast detail)Scoree value
O65357 Aquaporin 24468e-043
Q9XGG8 Putative plasma membrane intrinsic protein4413e-042
Q506K1 Putative aquaporin4351e-041
B7FK88 Putative uncharacterized protein4271e-040
O80369 Plasma membrane aquaporin (PAQ2)4234e-040

Arabidopsis top hits (Blast detail)Scoree value
AT5G60660.1 PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel4663e-047
AT3G53420.1 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel4082e-040
AT3G53420.2 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel4082e-040
AT2G37180.1 RD28 (RESPONSIVE TO DESICCATION 28); water channel4011e-039
AT2G37170.1 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel4001e-039

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information