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Information for unigene UN43996
| FASTA Sequence |
| Unigene ID: UN43996 | Length: 785 |
SSR | | CCTAGAAAAAAACATTGCAATAGCTTAAATCTTTATTTGGTTTCATGTAAATGTTTTACAGGGTAGACGCATCCACCTTAGTAATT
TCTGAGTTCAGCTATTACTGATAAACATAAACACCTCACTCTGAGGTTGAAAAACTGGTTAAACAGACTAAGATTCGGCAGACGAG
GCTGCGTCATCTTTGTGCTTAATCATACCCGAGTCCACAAGAATTGGAATCTCTGCAGCAAGCCACGGAGCCAGCCCCAAACAAAG
TGCATGCGCTATACCAAACCTAGGGCAGTTTTTAGCCCAGAGCGGCTTGAAATGCACAGTCAGACAAATCTTCCCACCTCGATACA
TCTTTTGTGTTTTGCCGTCAATCTCAGGCAACTCGAGCTCGGGAGCAGTGGCGGGGTACGTGATGGGGATATCGAATTGGAGATTG
AACTCGTACTTGAGGAGGTTGTGAACGTACCAGCACTTGCCGGTCCAGCGGGTGCCTTCGGGATTGGAGGCGGAGATGCGGAACCA
ATCGTTGTCGTTGGACTTGTTCATCTGGGTGTACGCGATCAGAGATTTGTACTCTTCTTTCAGCCTCTGTTTCCATGCGTCGCCGT
CTCGTGGTCCCGCCTTTGTGGTTAGAAGAGGGATTCTCGTTAGGGTCGATTTGGTGCTCGGATCCCATCCTTCCATTTTGCTCTCT
CTCTCTCTCTCTCTCTCTCTCGCTGATTTTGGGCGTAAATGTTAAGACTTTTGATCGATTGTTTTTGATTCTGATTCCTTTCTCTT
TTAGCTATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564289 ubiquitin-fold modifier-conjugating enzyme 1 [Arabidopsis thaliana] | 922 | 2e-097 |
| AAN65067 Similar to CGI-126 protein [Arabidopsis thaliana] | 918 | 6e-097 |
| XP_002301104 predicted protein [Populus trichocarpa] | 891 | 8e-094 |
| ACU16907 unknown [Glycine max] | 888 | 2e-093 |
| XP_002509999 Ufm1-conjugating enzyme, putative [Ricinus communis] | 886 | 3e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SXC8 Ubiquitin-fold modifier-conjugating enzyme 1 | 922 | 9e-099 |
| A2Z5S8 Ubiquitin-fold modifier-conjugating enzyme 1 | 802 | 7e-085 |
| Q8S625 Ubiquitin-fold modifier-conjugating enzyme 1 | 802 | 7e-085 |
| Q1ZXC9 Ubiquitin-fold modifier-conjugating enzyme 1 | 669 | 2e-069 |
| A7SM54 Ubiquitin-fold modifier-conjugating enzyme 1 | 668 | 3e-069 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PCY0 Predicted protein | 891 | 5e-094 |
| C6T5A5 Putative uncharacterized protein | 888 | 1e-093 |
| B9R6Q6 Ufm1-conjugating enzyme, putative | 886 | 2e-093 |
| C6SXY5 Putative uncharacterized protein | 875 | 4e-092 |
| A5BZY4 Putative uncharacterized protein | 867 | 3e-091 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G27530.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 183 Blast hits to 183 proteins in 80 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink). | 923 | 6e-100 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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