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Information for unigene UN44046

FASTA Sequence
Unigene ID: UN44046Length: 839 SSR 
ACTTGAAAAGAGTTTTTTTTTGTTGGTTCTCTCTTTAGTTGTAACGTTACATTTTCATGTGGGAAACAACATAAGAAAAGCAATCA
GTCAAATGTTCCTAACAAAATCATCACTATACCAATAACACATCATCATCTCTGCTTTGAGGCTTCTTCTTCTTCTTAGGTGCTCG
CATCAAACAGTGGGATGATAAAAAAAATCTCAGGAGGATACTTTTTCGGAGGTGGAGCTCAAACCAGATCCTGAACTGGTGAAGAC
AGGATTGTCTCTAGGCGTAGAGGGAGCTCCACGACCACTTGCACTGTTTCCCATATCTTTAGTCTTATGAAGCAAAAACGTTCCTG
ACAAAATGGTGACAAAACCGCACAGTTCTGTCGCTATCTTTAACCCGCTCTGCGAAGCCCAATCCTTGAACATGATCATACTAGCT
ATGATGGTGAAAGTTGTGAACATAACGAAGTAAACCGGAAAAATAACCGCTGTGTTGAACGTATCCAATGCCTTTTGCCAAAAATA
CAACAGAGAAACTCAGAGATAATAGAGTGATAACCAGTGAAAGTTGGAAAGCTTTTTGTTTACCTTGTTCAAGTAATTGATTTGCA
GAATGCAACAAACCGTGACTACTATAATAAAAATCCAAGTTTGGAAGTATTTGAACTGATTCATCTCTGAAAATGTCAGCTTTATG
GCGATGGCCACAGCTTTCACACTCATAACAGTAAGAGAACCCATTAAAGAGCAGATTCCAACATAAACTATCAAGTGAGTCTTCCC
ATAGCGAGGTTCATAGTAGAAGATGAGTACAAGCACCGCAATCACATCACAGCAGAGTACACTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_189029 uncharacterized protein [Arabidopsis thaliana]4402e-041
XP_002883467 hypothetical protein ARALYDRAFT_898929 [Arabidopsis lyrata subsp. lyrata]4213e-039
CAN76682 hypothetical protein VITISV_037792 [Vitis vinifera]4151e-038
XP_002868336 hypothetical protein ARALYDRAFT_493534 [Arabidopsis lyrata subsp. lyrata]3953e-036
NP_567411 uncharacterized protein [Arabidopsis thaliana]3918e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q0D2K0 Magnesium transporter NIPA42042e-015
Q8BZF2 Magnesium transporter NIPA41916e-014
Q8N8Q9 Magnesium transporter NIPA21791e-012
Q5R7Q3 Magnesium transporter NIPA21791e-012
Q3SWX0 Magnesium transporter NIPA21782e-012

TrEMBL top hits (Blast detail)Scoree value
Q9LIR9 Gb|AAF34307.14401e-041
A5BBR6 Putative uncharacterized protein4159e-039
B3LFA3 At4g138003916e-036
Q8LA45 Putative uncharacterized protein3891e-035
B9RWD1 Non-imprinted in Prader-Willi/Angelman syndrome region protein, putative3342e-029

Arabidopsis top hits (Blast detail)Scoree value
AT3G23870.1 permease-related4415e-044
AT4G13800.1 permease-related3913e-038
AT1G34470.1 permease-related2857e-026
AT1G71900.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: permease-related (TAIR:AT1G34470.1); Has 875 Blast hits to 858 proteins in 150 species: Archae - 0; Bacteria - 55; Metazoa - 361; Fungi - 238; Plants - 146; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink).2784e-025
AT4G09640.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF803 (InterPro:IPR008521); BEST Arabidopsis thaliana protein match is: permease-related (TAIR:AT1G34470.1); Has 864 Blast hits to 850 proteins in 148 species: Archae - 2; Bacteria - 54; Metazoa - 361; Fungi - 239; Plants - 141; Viruses - 0; Other Eukaryotes - 67 (source: NCBI BLink).2722e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information