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Information for unigene UN44060
| FASTA Sequence |
| Unigene ID: UN44060 | Length: 917 |
SSR | | CAGTTCATGATACAAAACAAGCTACTTGGTTTCACAAAGAAAATACAACAAATAAAGATCGAGAAAACAAACAGGGAAAATTTTCA
ATTGAGCAACTCAAGACACTGTTAAAGAGTTAAAACTAGGACAGTGTCGAATGTTCTCAAAGCAAGTCACTCACTCTAGGATAAGA
TTACGAGTCAAAAACAGAAAATTTTCTCTGATTCCTGTCTATTCAACAGTACTCTCCCCTCAGGCAACCAATTCAAATTCTGCAGG
AACATGGTTTTGGAAAAACGTTTTGTAATCCAAGCTCCTTGCGGTTTCAAAGAAATGAGCCACGGCTTCCTCTGGCGTCCCTACCA
AGACACCATGTCCTAAGTTGAGTATATGCCCTTTTGGTCCAGCACTCTTCACCACTCTTTGGATTTCTTCGGTTAAAGCAGGAAGC
GGAGTGAGGATGTCGGAGAAGATGATGACGCCATCTGGTTTGAATGCTTGCCAAGGCTGCAGAGAGATCTCAACGATGAGGTCAGT
GTTCTCTGATCTCTCTCTGAAGGAAGGGTGCTTTTGGGCGAGCTTTTTGTAGACGGACATGTACCTTCCCGCTTGACGCATCATCC
AAGCTGGTGGGCGGGACACTGCTTGCCCTTTAGCAGCTTTGACCAATAGTGGATCTGAGGATGAAGAGGAGGAGGAGGAGGAGGAA
GCTATGACGAGCTTGCGAGGAGCGTTAGTGTGTCTTCTTGGGTATGAAACTAATCCCACATTGATGGGACTTGATCGAAACCCTAT
TGGTAACGATAAGCCCGAGGAGTAACATCTTGACGAGCTGCAGGCACTGGTTGGCGATGATAAACTCATTCTCAATCACGCAAGAG
CCTGAAGTTCGAAGATCAAACTGCTGTCTGATTTTTCCTGCTCTGGTGTTTCCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882903 hypothetical protein ARALYDRAFT_478916 [Arabidopsis lyrata subsp. lyrata] | 606 | 1e-060 |
| NP_566495 uroporphyrinogen decarboxylase 1 [Arabidopsis thaliana] | 592 | 5e-059 |
| AAL15294 AT3g14930/K15M2_7 [Arabidopsis thaliana] | 585 | 3e-058 |
| ACJ85135 unknown [Medicago truncatula] | 408 | 1e-037 |
| CAN82689 hypothetical protein VITISV_026490 [Vitis vinifera] | 382 | 1e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93ZB6 Uroporphyrinogen decarboxylase 1, chloroplastic | 592 | 2e-060 |
| Q9AXB0 Uroporphyrinogen decarboxylase 1, chloroplastic | 348 | 4e-032 |
| Q10LR9 Uroporphyrinogen decarboxylase 2, chloroplastic | 341 | 3e-031 |
| O22886 Uroporphyrinogen decarboxylase 2, chloroplastic | 334 | 2e-030 |
| B1XIF6 Uroporphyrinogen decarboxylase | 331 | 4e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B7FK50 Uroporphyrinogen decarboxylase | 408 | 7e-038 |
| A5AYA5 Uroporphyrinogen decarboxylase | 382 | 7e-035 |
| B9N974 Uroporphyrinogen decarboxylase (Fragment) | 376 | 4e-034 |
| C5XR61 Uroporphyrinogen decarboxylase | 373 | 8e-034 |
| B9SGB6 Uroporphyrinogen decarboxylase | 368 | 3e-033 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G14930.1 HEME1; uroporphyrinogen decarboxylase | 609 | 2e-063 |
| AT3G14930.2 HEME1; uroporphyrinogen decarboxylase | 609 | 2e-063 |
| AT2G40490.1 HEME2; uroporphyrinogen decarboxylase | 334 | 2e-031 |
| AT3G14930.3 HEME1; uroporphyrinogen decarboxylase | 301 | 1e-027 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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