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Information for unigene UN44085
| FASTA Sequence |
| Unigene ID: UN44085 | Length: 721 |
SSR | | GAGTTAAACATACGCATTAGTTCAAAAAAAAAGAATAAGTTAAACATACGTCATTTCATTTGGACATCTAGCTCTATTGAAGACCC
AGGAAGGCATCTCGCTCGTCATGTACATCATCTATCATTGAACTTTAATATATATATGTGTGTGTGTGTAGAGAGATAGATATTAC
CTTTTTAATACGAATTCCACGTAAACTCATTTCAAGTTGGCTTTCTATATTGTGCAACTCCTTGACGCTCAGACCATTTAATTGCT
GTCCCGTTAGTTGTCGATGAGTTTCCTGCAATGAGTGCAGTTCTTGTCTTAGAGTTGTGGCCTCTCTCTGCCAAAACTTAACTTCT
GATGCAGGGTTCAATAGTCGTTGCTGCTCCATCCTGGTCTTGTTGAATCGTTCTATAGTCGATTTCAAACTGGAGCTGGCAAAGTC
ATAGAGCTTGTCGGTATTGGAGAAAATGATGAGACCCACCTCTGCATCGCAGAGAATCGCGAGTTCTTTAGCTTTCTTTATGAGAC
CCTTTCTTCTTTTGGAGAAAGTGACTTGCCTACTAGTCGAATCATCGATCCTCTGGATCACAATCTTGCCTCTCCCCATCAATATT
AACCCTACTTTGATCTTCCCTCGATCTTGGCGATCTTCCCAGTTCTAGGGTTTTCTAGATCTTAGCAAGACCAAAGGAGGAAGAAA
AAGAAGAACGAATAAGGAGAAATAGATGAGACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878626 hypothetical protein ARALYDRAFT_320100 [Arabidopsis lyrata subsp. lyrata] | 630 | 1e-063 |
| NP_179848 agamous-like MADS-box protein AGL17 [Arabidopsis thaliana] | 618 | 3e-062 |
| NP_195507 agamous-like MADS-box protein AGL21 [Arabidopsis thaliana] | 595 | 1e-059 |
| AAC49084 MADS-box protein AGL17 [Arabidopsis thaliana] | 583 | 3e-058 |
| XP_002518331 mads box protein, putative [Ricinus communis] | 545 | 9e-054 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38840 Agamous-like MADS-box protein AGL17 | 618 | 1e-063 |
| Q9SZJ6 Agamous-like MADS-box protein AGL21 | 595 | 6e-061 |
| Q6EP49 MADS-box transcription factor 27 | 514 | 2e-051 |
| Q6VAM4 MADS-box transcription factor 23 | 501 | 5e-050 |
| Q6Z6W2 MADS-box transcription factor 57 | 458 | 5e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0SV55 Putative uncharacterized protein At2g22630 (Fragment) | 618 | 2e-062 |
| Q29PR0 At4g37940 | 595 | 1e-059 |
| B9RX62 Mads box protein, putative | 545 | 6e-054 |
| B9SMY1 Mads box protein, putative | 534 | 1e-052 |
| B9GN74 Predicted protein | 533 | 1e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22630.1 AGL17 (agamous-like 17); transcription factor | 618 | 1e-064 |
| AT4G37940.1 AGL21; transcription factor | 595 | 6e-062 |
| AT3G57230.1 AGL16 (AGAMOUS-LIKE 16); transcription factor | 493 | 4e-050 |
| AT2G14210.1 AGL44 (AGAMOUS-LIKE 44); DNA binding / transcription factor | 488 | 2e-049 |
| AT3G57230.2 AGL16 (AGAMOUS-LIKE 16); transcription factor | 398 | 4e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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