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Information for unigene UN44124

FASTA Sequence
Unigene ID: UN44124Length: 721 SSR 
CATAACAAATGGCAATTAAGTAGAACTGGTCGAGAACAGTAATGTGAACGACAACTGTCAATTTACAACACACTGAACCAACGCAC
AACAACAGTCTTTACTCTTTTTCATTTTAGTTTTTGTTTTGACATAAATAGCACAACACATAAGAAGGCGTATGTATCATCTCTGA
AGCAAGCCTCCTTTTGGTCATATAACCTTTCTTATTATTTTCTTGAAGAATCAGAAACTCTTCCTATGTTGGCGTTTCTAGACGGA
TTGAAGCGGAGAGTCCTCTCCTGTACAACAGCCTCAAGCAATTCCTGACCAGTGGGGTCTTTGAGACTAATAGATTGCCAACACAT
AGGGCACTGTGAACTCCTTTGACACCACTCAAGGATGCATTGGAGATGATACTCATGCTTGCAACTAGTCAAAGTAGAAGGATCGG
AATCGCAGAAGGGTTCGAGACAGATGCTACAAGCATCATCACAAGCCTCTTGGATTCCCCCTTCCACAAACGCTGCTGCTGATATC
ATATTCCCTTCCGACGTCGTCGTCGTCGTCGTAGTCGTATCTCCTTCAACTCCCTCCATTGAAATCGCGATGATGAAGAGAAGACG
ATCGATGAAATCTATAATCTAGGGTTGAGAGAGATAACGAAACCCTGGATTCATGATATATGATACTACAAAGACTCTTCCTTTTC
TTCTTCTTCTTCTTCTTCTCTGCGCGTCGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_851051 E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]4973e-048
NP_568410 E3 ubiquitin-protein ligase RHF2A [Arabidopsis thaliana]4964e-048
BAH19547 AT5G22000 [Arabidopsis thaliana]4964e-048
XP_002871983 hypothetical protein ARALYDRAFT_489047 [Arabidopsis lyrata subsp. lyrata]4964e-048
BAJ33931 unnamed protein product [Thellungiella halophila]4947e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZT42 E3 ubiquitin-protein ligase RHF2A4962e-049
Q4TU14 E3 ubiquitin-protein ligase RHF1A2873e-025
Q9VE61 E3 ubiquitin-protein ligase CG76941404e-008

TrEMBL top hits (Blast detail)Scoree value
Q2HT04 Zinc finger, RING-type4651e-044
C6TB16 Putative uncharacterized protein4641e-044
B9GEQ0 Predicted protein4515e-043
B4FLK1 Putative uncharacterized protein4344e-041
C0PNC9 Putative uncharacterized protein4344e-041

Arabidopsis top hits (Blast detail)Scoree value
AT5G22000.2 RHF2A (RING-H2 GROUP F2A); protein binding / zinc ion binding4971e-050
AT5G22000.1 RHF2A (RING-H2 GROUP F2A); protein binding / zinc ion binding4962e-050
AT5G22000.3 RHF2A (RING-H2 GROUP F2A); protein binding / zinc ion binding4962e-050
AT4G14220.1 RHF1A (RING-H2 GROUP F1A); protein binding / ubiquitin-protein ligase/ zinc ion binding2873e-026
AT4G23450.1 zinc finger (C3HC4-type RING finger) family protein1413e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information