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Information for unigene UN44125
| FASTA Sequence |
| Unigene ID: UN44125 | Length: 1554 |
SSR | | GGCAAAACCATATCTGTATTTTAAAAAAAAAAATTTGGAGGTGTTCCGACAAAACATTCATCACATGACATACTCTCATAGTCATT
GGTAAACGATAAGATTATCCAACAAGACAACCCAAAAAGTGAAGACAGTTTGTTTTATCTGATGATGACAATACACAGAAAAGGAG
TCCAAAAGATAAGCAGAGAATCCAAAAGAAGATCCTAACCTTCTACCACGTGTACAGATCACATAATGGGGCTGTGCTTTGGTCTC
TTGCCTTCTCCATGAACTACTGGCGAACTCATATCTTTTTAACGATCTGAACAACATCCTCGTCCTCGAGCTCGTGCTCCCTTCCA
ACTCTTTGTGGCTTATGTTTTGCACTCGAACCCCATACTAAAGCGTACTTGAATTGCTTAAGCATGTCTTTGTGAATCCGAATGCA
GAAGTCCTCAACTGTTCTCTTCTTGGAAGATAAGATGACAGGGTCATCGTAATCCGGATTCATTGCCTTTGGTTTGGTGTAGATTC
TAGTAAGATCCAAGTATTCCCATATCTTATCGAGAAGACCATCAAGATTCCACTCCAGATGCGCACTGACAGGACAGTAATGAGGA
AGTCTGTCCAAAATTTCAAGTTCCTCGAGAGTTATTTGGTCGATCTTGTTGACAGCATAGATACAGGGCATATAGATGCGACTGCC
CTCAATGACATCGATGAGGTCATCAGCAGTTGCATCGTAGCGCAGAGTGATATCGGCGTTGTGCATCCTGTACTCACTGCATATGG
CCTTGACAGTGTCGAGGTCAAGGTGCGTGCAGGTGACTGTGGAAGTTAAATTGATACCACCTTTGTCTTTTTTCCTGAATGTGAGA
TTAGGTGGCTCCTTGTTCAACCTAATTCCGAATCCTTCAAGCTCCTTTTCAATGAGACGCTTGTGAGTTATTGGCTTTATGGCATC
AAGAACTATTATGATGCAGTTGCAAGTCCTAGCAGTACTTATAACCTGTCGTCCTCTACCTTTTCCGTCTTTGGCACCCTCAATAA
TACCAGGAAGATCCAATAACTGAATTTTAGCTCCACGGTATGTAATAACACCGGGAATGCATGTCAGTGTTGTGAACTCATAAGAA
GCAACCTCGGAAAAGGTTCCAGTGAGCTTGTTCAAGAGGGTGGATTTGCCAACGGAAGGAAAGCCAACAAGTCCAACTCTAGAATC
ACCACTTTTGGTGACATCAAAACCTTCGCCAGCAGCAGCACCACCACCTTTAGTAGGTGGTGCAAGAAGGTCCCTTCGTAGCTTGG
CAAGTTTGGCCTTTAACAAACCGAGATGGTGAGCGGTGGCTTTGTTCTTCTGAGTCCTTGCCATCTCATCTTCGATTTCTTTGATC
TTCTGCATAATAGTCGACATGATTGCAGTTACAGCAGAAAGAGCGAGCCTCACAGATGCAGCGTCGTCGAGGTAAAGAGCTTAAAC
GTGAGTGAGTGAGTGAGTGAAGGAAGGGCAGAGAGAGAGAGAGAGAAGACCAGAATGAATCAGAGGAGCCCCGAGGGTTTTCGTTT
CTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868910 hypothetical protein ARALYDRAFT_912415 [Arabidopsis lyrata subsp. lyrata] | 1872 | 4e-207 |
| NP_195662 GTP-binding protein-relatedlike protein [Arabidopsis thaliana] | 1871 | 5e-207 |
| XP_002532275 developmentally regulated GTP-binding protein, putative [Ricinus communis] | 1798 | 1e-198 |
| XP_002310030 predicted protein [Populus trichocarpa] | 1796 | 3e-198 |
| ACU21287 unknown [Glycine max] | 1792 | 7e-198 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54HP3 Developmentally-regulated GTP-binding protein 1 homolog | 1416 | 1e-155 |
| Q3MHP5 Developmentally-regulated GTP-binding protein 1 | 1399 | 1e-153 |
| Q9Y295 Developmentally-regulated GTP-binding protein 1 | 1399 | 1e-153 |
| P32233 Developmentally-regulated GTP-binding protein 1 | 1396 | 3e-153 |
| P43690 Developmentally-regulated GTP-binding protein 1 | 1389 | 2e-152 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SVA6 GTP-binding-like protein | 1871 | 3e-207 |
| B9T206 Developmentally regulated GTP-binding protein, putative | 1798 | 1e-198 |
| B9HG22 Predicted protein | 1796 | 2e-198 |
| C6THI5 Putative uncharacterized protein | 1792 | 5e-198 |
| A8WE95 Developmentally regulated GTP binding protein 1 | 1780 | 1e-196 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39520.1 GTP-binding protein, putative | 1872 | 1e-209 |
| AT1G17470.1 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 1088 | 1e-118 |
| AT1G17470.2 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 1088 | 1e-118 |
| AT1G72660.1 developmentally regulated GTP-binding protein, putative | 1086 | 2e-118 |
| AT1G72660.2 developmentally regulated GTP-binding protein, putative | 1086 | 2e-118 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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