 |
Information for unigene UN44179
| FASTA Sequence |
| Unigene ID: UN44179 | Length: 1266 |
SSR | | GGAAACGGCTCTCGATCTTCGTCACTGTTCTCGAGATTCTCTGTGATTTTTTTTTTTTCTCTCTCTCTCGTTATTCAATTCTCGGA
TTAGCTTTTTTGGTTTCCTTGTTGTTGTCTGGATCATCGAAGAAGGATGGTAGCTGATAGCAAATCCGACCTTTCATTGCCAAAAA
CTTTCGCCTGCAGTGCCTTCGCTGCCTGCGTCGGCGAGGTATGTACGATTCCGTTGGACACTGCGAAAGTGAGGCTTCAGCTCCAA
AAGTCTGCCATTGCTGGAGATGTTACTCTGCCTAAGTATCGTGGATTACTCGGGACTGTTGGTACCATAGCAAGAGAAGAAGGGCT
TCGTTCACTATGGAAAGGTGTTGTACCTGGCTTACATCGTCAATGCCTCTTTGGAGGTCTTAGGATCGGAATGTATGAGCCGGTCA
AAAACTTGTACGTTGGGAAAGACCATGTAGGCGATGTTCCTTTGAGCAAGAAGATCCTTGCTGGTTTGACCACAGGTGCTCTGGGT
ATCATGGTAGCGAATCCCACTGATCTTGTGAAAGTTAGACTTCAGGCTGAAGGGAAACTAGCTGCAGGTGTGCCAAGACGCTATAC
TGGATCTTTGAATGCCTATTCAACCATTGTCAGACAGGAAGGAGTCAGAGCACTTTGGACTGGTCTTGGACCTAATGTTGCTAGAA
ACGCAATTATCAATGCTGCTGAATTAGCGAGTTACGATCAAGTGAAGCAGACAATCTTGAAGATTCCGGGTTTCACTGATAACATT
GTCACGCATATTCTATCTGGACTGGGAGCAGGATTCTTTGCTGTCTGCATTGGTTCCCCTGTTGACGTGGTTAAGTCAAGAATGAT
GGGAGATCCTTCTTACAAAGGCACTATCGACTGCTTCGTCAAAACTTTGAAGGCTGACGGACCCATGGCATTTTACAAGGGTTTCA
TCCCCAACTTTGGACGCCTTGGCTCATGGAACGTCATCATGTTTTTGACCCTTGAACAGGCAAAGAAGTATGTCCGGGAACTAGAA
TCGTCTAAGGAATAATAGTGAGACAAAATAAAAAAATTTATGCAGAGAGAATAAAAAAAAACATTGTTTTCTTTTTAATTTCGGTG
GTCGAGAGAGAGAGAGAGAGTGTTGCCAGAACGTAATCGAATATTGTTTTGGAATAGAGACTTGATTTCGAGCAAACTGTGAAATA
AATTTCTATGGGTGGCTGTACCATTCAAACAATCATTAAAATCATAATACATTTTTTCGTCG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190979 uncoupling mitochondrial protein 1 [Arabidopsis thaliana] | 1486 | 2e-162 |
| CAA11757 plant uncoupling mitochondrial protein [Arabidopsis thaliana] | 1477 | 2e-161 |
| XP_002527871 mitochondrial uncoupling protein, putative [Ricinus communis] | 1356 | 2e-147 |
| XP_002308202 predicted protein [Populus trichocarpa] | 1350 | 1e-146 |
| XP_002322953 predicted protein [Populus trichocarpa] | 1344 | 5e-146 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P70406 Mitochondrial uncoupling protein 2 | 699 | 1e-072 |
| P56500 Mitochondrial uncoupling protein 2 | 699 | 1e-072 |
| Q3SZI5 Mitochondrial uncoupling protein 2 | 698 | 2e-072 |
| O97562 Mitochondrial uncoupling protein 2 | 697 | 2e-072 |
| Q9N2I9 Mitochondrial uncoupling protein 3 | 697 | 2e-072 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81845 Mitochondrial uncoupling protein | 1486 | 1e-162 |
| O65623 Plant uncoupling mitochondrial protein | 1477 | 1e-161 |
| B9SPF2 Mitochondrial uncoupling protein, putative | 1356 | 1e-147 |
| A9PAU0 Predicted protein | 1350 | 7e-147 |
| B9IG38 Predicted protein | 1344 | 3e-146 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54110.1 PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler | 1486 | 6e-165 |
| AT5G58970.1 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler | 1132 | 7e-124 |
| AT5G58970.2 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler | 891 | 6e-096 |
| AT2G22500.1 UCP5 (UNCOUPLING PROTEIN 5); binding | 520 | 7e-053 |
| AT1G14140.1 mitochondrial substrate carrier family protein | 482 | 2e-048 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
