Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN44348

FASTA Sequence
Unigene ID: UN44348Length: 771 SSR 
GGTAGACATCACTTCTTATTAAAACCGGTAGACCGTGCTCATATGTATCAGCAATAACATTGTAAACCATGTTCAAGAAGAAACAT
CTCTTTTGCAGCCTTACATATGAATTGTTAATAATGTATTCGTTTTCCCAAATCATTTTTCATTACATTTCACAGAAAACGAGTTA
TAACCCGAAAAGAGAGCAAAGAGAGGATCATCCTTTCTTGGGCATAGCGGCGAGGCGTGTGTACATGCGTGCCATTGAATCGAAGC
CTCTGACATCCCCAGACCTTAGAAGGTTTCCTGAGTCGCAGTTGAGAGGACTGTCTGCCTCAGGATGAGCCATCAATGCTATGATA
GCTCTACACACCGACTGAAGCGTCCACGCAGGGCTCCAGGCGTTCTTCAATATGTCAAGACAGATTTCCCCAGTCTTGAAATGTAC
ATCGGGATGGAATATTTTGGTCAAGAACCGCACTTGAGGAGGCTGCAGAGGATACGGTTCAGGAACAGCAAAAGCAAGCTGAAACA
CTCCGCCTTCATAAGGAGTCTCGGATGGTCCCTTGATAAGTGCAGTCCATTTGAAAATGTTGGTATCATCACACACCAATTGAATA
TCAGGATCAGCTACTTTCTCTCTCTGAACCTCTTTGTACTCCTTGAACAGTCTAGCTCGTGATTGCCGCATGTCTGAATTTGCACA
AAGAAGTCGATCACGCCAACTTCAAGAGAGAGAGAGAGAGAGAGAACGTGGACGAAGAAGAAACGGAGATGAGAACTTTCACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872181 predicted protein [Arabidopsis lyrata subsp. lyrata]8146e-085
NP_568476 putative ubiquitin-conjugating enzyme E2 21 [Arabidopsis thaliana]8065e-084
XP_002284068 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]7895e-082
NP_001130714 hypothetical protein LOC100191818 [Zea mays]7823e-081
XP_002324810 predicted protein [Populus trichocarpa]7797e-081

Swiss-Prot top hits (Blast detail)Scoree value
Q8LGF7 Probable ubiquitin-conjugating enzyme E2 218062e-085
Q86IZ3 Ubiquitin-conjugating enzyme E2 pex45105e-051
Q9P6I1 Ubiquitin-conjugating enzyme E2 163734e-035
O74201 Ubiquitin-conjugating enzyme E2 22856e-025
P61085 Ubiquitin-conjugating enzyme E2 K2759e-024

TrEMBL top hits (Blast detail)Scoree value
B6T659 Ubiquitin carrier protein7822e-081
A9PEE9 Ubiquitin carrier protein7795e-081
B9H912 Ubiquitin carrier protein7795e-081
B4FA99 Ubiquitin carrier protein7787e-081
B9T5D3 Ubiquitin carrier protein7751e-080

Arabidopsis top hits (Blast detail)Scoree value
AT5G25760.1 PEX4 (PEROXIN4); protein binding / ubiquitin-protein ligase8072e-086
AT5G25760.2 PEX4 (PEROXIN4); protein binding / ubiquitin-protein ligase8072e-086
AT5G53300.1 UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase2892e-026
AT5G53300.2 UBC10 (ubiquitin-conjugating enzyme 10); ubiquitin-protein ligase2892e-026
AT2G16740.1 UBC29 (ubiquitin-conjugating enzyme 29); ubiquitin-protein ligase2883e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information