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Information for unigene UN44367
| FASTA Sequence |
| Unigene ID: UN44367 | Length: 780 |
SSR | | ATAAAAACTCTGAAGTATAACCATAACTGTTGCAACATTACACTGAGTTTATATCATATTGTCATAAAACGATACAAAGAAAACAA
GTATCACAGCTAAAGGAGACGAAAGAGGTTCACATCAACCACACTTTATAGTCCAGCTAAACCCCGTCTAAACCCGCTTTGCTTTC
TTCTTCTTAGAGAAGCTTTCAGGAGTTCTGCTTTCTTGTTTACGCTTAGTCCCTGCAAATTTCTTCGTCGTCTCCTCCACGCTTCC
TCCGTACTTCTTCGTCTCGTAATCGTTCTCAATCTCGTCTCTCTTCCTCTTCTTCCTCTTCGACTCCAACCCACTTTCTTCCGCAG
CCTCTGCGTCGGAATCTGAAACCAAAGCTTTGACCTTTTTGGATTTCTTCGTCTTCACGGGCGAATCTGTTTCTTCCTCTTCATCG
TTATAGGTTTCGTCGTGAATTGTTGGGTCGGGCTTCTTTCGCCGGAAAGGGTTGTTATCGGAGAGAGAGAGAGAGAGAGAGAGAGG
TAAAAGGAAACCGTGCCGATTCACTTGCCAGGGAGGCGAAAATTAGTGGTATTCTTTTTTCCCATATAGATCAGATTCAGTCGGAC
AGAACGTTTCTACGGGATGCTTCAGGACCATCTATCACTTGATCTTAGAAGATGGACGTCGACAAAAAAAAAATATAGAGATGTGG
TGGGCGTAGAGTCTCTAGAATCTGCTGGGAAGAAAAAAATCTCCTATCACCAACCAGGTCGCACAACTCGTAACTAATTCATTCTT
TACCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199496 RNA recognition motif-containing protein [Arabidopsis thaliana] | 232 | 2e-017 |
| AAM63703 unknown [Arabidopsis thaliana] | 220 | 5e-016 |
| XP_002865157 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 167 | 7e-010 |
| XP_002527654 RNA binding protein, putative [Ricinus communis] | 161 | 3e-009 |
| NP_001078722 RNA recognition motif-containing protein [Arabidopsis thaliana] | 145 | 2e-007 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUK6 At5g46840 | 232 | 1e-017 |
| Q8LCE5 Putative uncharacterized protein | 220 | 3e-016 |
| B9SNT5 RNA binding protein, putative | 161 | 2e-009 |
| A8MQH7 AT5G46840 protein | 145 | 2e-007 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G46840.1 RNA recognition motif (RRM)-containing protein | 232 | 8e-020 |
| AT5G46840.2 RNA recognition motif (RRM)-containing protein | 145 | 1e-009 |
| AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase | 114 | 4e-006 |
| AT5G41020.1 myb family transcription factor | 113 | 5e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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