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Information for unigene UN44373

FASTA Sequence
Unigene ID: UN44373Length: 861 SSR 
CGCAGAATTCTCCAAAATGTAGATAAGTCTTGAGAACCATTAAAAAAAAACATCACAAAATGATAAGAGTAGCCATTCAACCAAGT
AAAGACAGAGTCACAAAGAAGATCTTATTAAAGTTGGTCTCATCATCTCTTATGTTGCTCCTAAGGATTTGCTGCTACCTAGAGAA
GCAGGGTGGGACTTGGCTAAGCAGTCATGGGATCCTCCTCCTCCTCCTCCTGGTCGCTGTTCTCAGATCCCTGGCTGCTGCTTGTA
GTAGAAGACCCATCACCACCACCATTTGTCTCATCCTCCGCAGTCGGTAGCTGAGACCTACAAACCGGGCAGGAGCTATGAAGCTG
AAGCCAGTAGAGCAAGCAGTAACTGTGAAAGAAGTGCTCACAAGGCATCTGTTTCCCAACAGTCCCCATCTCGAGATCATCCAAAC
AAACCAAACACTGCATCCCCGGCACAAGGACGATCACATTAGCCAAAGTCTCAACAGCATCTCTCCGAGCCGGAGGCGTTCCATAC
CTCCTGGGATCAGTCTCGGTCAAATCCTCAAGCATGGCTTCGAACTCAGGACCGATGAAGTACTCGCTGAGAGAGCCATCAACGGG
AGGCAGAGTGTCGGAAACAGCAGAGCTCGGGACAGCGACGATCTGGTTGTAGGAATTGGTGACGATCACGCGTCCTCTCTCTCTAC
CAGCATCATCAGCAGCAGCAGGAGGTGGGTTGTTGTTGTTGTTAGTAGAGTCATCGTCAGCAGTAGCAGGGGCAAGGGTTAAGCCA
GTACGTATGCCCTGAAGCAGCTGGTCAATGGAAACGGGACGTCTTCCTCTTCTCTTGAGAATCTCTTGAAGCTGTGAATCCATGTC
C

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894508 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]5342e-052
NP_564693 RING/U-box domain-containing protein [Arabidopsis thaliana]5253e-051
XP_002285765 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]4392e-041
ADK63410 C3HC4 type zinc finger protein [Brassica rapa]4161e-038
NP_001147077 RING finger protein 126 [Zea mays]3935e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9BV68 RING finger protein 1262014e-015
Q0II22 RING finger protein 1261971e-014
Q91YL2 RING finger protein 1261971e-014
Q7T0Q3 RING finger protein 126-A1962e-014
Q6IRP0 RING finger protein 126-B1952e-014

TrEMBL top hits (Blast detail)Scoree value
Q9ZVU8 At1g55530/T5A14_75252e-051
B9GLB5 Predicted protein (Fragment)3997e-037
B6SKJ6 RING finger protein 1263934e-036
B9GXX2 Predicted protein (Fragment)3791e-034
Q6NMJ8 At3g134303702e-033

Arabidopsis top hits (Blast detail)Scoree value
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein5251e-053
AT5G56340.1 zinc finger (C3HC4-type RING finger) family protein3743e-036
AT3G13430.1 zinc finger (C3HC4-type RING finger) family protein3701e-035
AT3G13430.2 zinc finger (C3HC4-type RING finger) family protein3701e-035
AT3G19950.1 zinc finger (C3HC4-type RING finger) family protein3152e-029

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information