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Information for unigene UN44388

FASTA Sequence
Unigene ID: UN44388Length: 743 SSR 
GGTATTTTAATGGATCATTAAAAAGCAAACCATTTTGCAAATCGTCAAATAGACCGTTTCAAACAACTACTAGGTTTTGTATGGTG
TGATACAGATTTGCTGGTGCCCAAGTATGTATGGAATATAATGTAAAGAGAGAGAGAGAGAGAGACTCGATATTACTACGACCGTT
TGCATAGCAGCAAACCTGGTCGCTTATTCTTCTGTAAAATTGACTTGTGATATGTTTTTGTTCAGGACTTGATGTTGTCTTTGGCG
GCGGCGTCACCAGCATCATCCTTGGCGTTGTCAGCAGCTGATGCGCTAGCTTGGTCATCGAGAGGTTCGTTGTTGTCAGCCTCAGC
GTCTTCAGTGTTATCGCCTGAAGATAAAGCCATCCGTCTAGCTCTAGGTTGCTGGTGCGGGGTTGGCTGCAGTTTTGGTCGGAGAG
CTTCCAAAGGCCCTTTAGGCTTTTGTCCTTTTTGCTTGCCTAATGCCCAATCAGCAGAGTCAAAAAACGCGCGCTCATGATCCTTG
GATATCAAAGGAATCTTCTTTTGGCTGTTTATGAATCTCAGTTTCATTCTTGTTATCATTTTGGTCAACAGGAGGTGGAGTATCAT
CAACAAGCTCCTTTCCCTTGACGTCTTACATAACAACGAAAGGTGGATGAGGAACGCCGGTTAACCGTTAAAGAGATTCCGACGAG
AACCGGGGTTAGATCGGATCTTGTTACGTTATGTGAGCTCCACGTTCCACGATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887240 predicted protein [Arabidopsis lyrata subsp. lyrata]4185e-039
NP_564967 cAMP-regulated phosphoprotein 19-related protein [Arabidopsis thaliana]3925e-036
XP_002272133 PREDICTED: hypothetical protein [Vitis vinifera]2894e-024
CBI31940 unnamed protein product [Vitis vinifera]2894e-024
ACJ86098 unknown [Medicago truncatula]2761e-022

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C787 Putative uncharacterized protein3924e-036
B7FMW5 Putative uncharacterized protein2761e-022
Q60D28 Negatively light-regulated protein, putative2633e-021
B9HXY7 Predicted protein2615e-021
Q9ZTG1 Negatively light-regulated protein2581e-020

Arabidopsis top hits (Blast detail)Scoree value
AT1G69510.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4022e-039
AT1G69510.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4022e-039
AT1G69510.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64130.1); Has 92 Blast hits to 92 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).4022e-039
AT5G64130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 93 Blast hits to 93 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).2202e-018
AT5G64130.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Lg106-like (InterPro:IPR012482); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G69510.3); Has 91 Blast hits to 91 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).1914e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information