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Information for unigene UN44407

FASTA Sequence
Unigene ID: UN44407Length: 1042 SSR 
CGACACAGCTATCTATTCTATTACCAAATACCAGTCTTCAAAGACAAGGATGTTTGTGTCTGAAACCAAAAGAGCCAAGACCCTCT
TGGTTGCATAGAAGTTTTGACCAAACCGGAGTGAAGATGAATATTATACAAAATGTAAAAAAAAAAAAGCTCACAAGTGACAAACA
ATCTAAAAACTAACAAGTTTTTACAGCTACAAAACGTGTGAACGAACAAATCAAGCGACAGGAGGGATTTGATGTAGTGATTGCAC
GCGGCTCAAGAACAGGAGAAGAAGAGCGCGCGAGGGCCAAAGAGATAGAGAACTTGTTTTTCACTTGAGGACTTTGAAGTGAAAAA
GCCAAGAAACAATGAAGGCAAAGACCATAGCGGCAAGTAGGAAGTTCATAACACGGCGACCATGCCAGATTCCCCGGGGCTCTATC
TGACTCTGAGTTTGTCCTGCAGCCACCACTTGTGAATTTGTAGAGGCAGTGCTCTCTGGGTTTGACTGTTCCCCAGCTACGTTTAT
AGCCATTGCCCCGCATATCTCACATGTCATGTTTCCTTTGATCTTGAACCAAGTTTCAGCACACTTACTGTGAGCTACACCCAAAT
CACCTTTACAAGAACAACCCAATTGCAAAGGCAAACCATAATACTCTTCTTCAGCATCATCTTCTTCTTCTTCTTCTTTATCTACT
TCGTGTTCATCAGAATCATCCTCTTCTCCACCTTCTTTGCTACTCTCTAAAGGCAGATGACAGATCCTGCAATCTCTACTCTCTTT
CTTCTTCCTTTTCTTCTTCTTCTTTCTCCTCCTCACCCTCCTCTTCCTACCACCACCAGAATGTAGCTTAGTCACACCGCCGCTCT
CTAAGTCAACCTCAGACAAGGAATCCAAGTCCGAGGAGTCGCCGTCGATGCTAATTTCGACTGTGTACGGCGGCGACTCAGTGGGA
TTGGCCAAATGGTGATGAGATCCAAAAGCAAAAGAAGGCATTTTTTGTTGAAGATTAGAAGCAAAAGAGGAAGAAAGGGGGAGGGG
TCATGGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM61470 unknown [Arabidopsis thaliana]9511e-100
NP_200708 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]9457e-100
XP_002864605 hypothetical protein ARALYDRAFT_496027 [Arabidopsis lyrata subsp. lyrata]9261e-097
BAB09643 unnamed protein product [Arabidopsis thaliana]5102e-049
ABK94615 unknown [Populus trichocarpa]3651e-032

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8LFD7 Putative uncharacterized protein9511e-100
Q2HIG9 At5g590009455e-100
Q9FIL2 Gb|AAD32776.15101e-049
A9PE12 Putative uncharacterized protein3658e-033
B9HPA1 Predicted protein (Fragment)3658e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G59000.1 zinc finger (C3HC4-type RING finger) family protein9462e-102
AT5G05830.1 zinc finger (C3HC4-type RING finger) family protein3101e-028
AT2G37950.1 zinc finger (C3HC4-type RING finger) family protein2705e-024
AT5G01070.2 zinc finger (C3HC4-type RING finger) family protein2642e-023
AT2G34200.1 zinc finger (C3HC4-type RING finger) family protein1551e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information