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Information for unigene UN44426
| FASTA Sequence |
| Unigene ID: UN44426 | Length: 1296 |
SSR | | GGAACGAAGAAGAAGAAGAGGAAGAAGAAGAAGAGGAAGAATGGGCAGTCCTTGGTACTTTGTGGCACTACTTCTCACTATTCTTA
CCAGCTCCCAGGGAGTTCTAACAACTCTATCTCAAAGTGATGAAGGAGGTTATAAGTACGATTATGCTACCGTTCCCTTTCTTGCC
GAAGTTCTCAAGCTGATCATTTCTGGTTTGTTTCTCTGGAGAGAGACCAAGACATCTTCTTCTTCTTCTTCTTCACCAACTGCAAA
GATTACTAAGGATTGGAAGAGCGTGCGCTTATTTGTTATTCCTTCAATTATCTATCTCATCCATAACAATGTCCAGTTTGCTACTC
TCACTTTTGTCGACACTTCCACTTATCAAATCATGGGTAACCTCAAGATCGTCACCACTGCCATTCTCTTTAGGTTATTTTTGAAG
AGGAAATTATCAAACCTTCAGTGGATGGCTATTGGTCTTTTAGCTGTTGGAACTACCACCAGCCAGATCAAGGGTTGCGGAGAAGC
TTCATGTGATTCCCTATTCACAGCACCAATACAAGGCTATTTGTTGGGCATCCTCTCTGCCGCTTTGTCCGCACTAGCCGGAATCT
ACACTGAGTTTCTGGTGAAGAGAAACAATGACAGCTTATACTGGCAAAACTTGCAGTTGTATACGTTTGGTTCACTTTTCAACGTT
GCTCGGCTTATAGCAGATGATTTCAGACTCGGGTTTGAAAAGGGCCCTTGGTGGCAACGTATCTTTGATGGCTATAGCATCACCAC
TTGGTTGGTTGTTCTCAATCTCGGATCCACCGGCTTACTCGTCTCTTGGTTAATGAAGTATGCAGACAATATCGTCAAGGTGTATT
CTACATCAATGGCGATGCTACTTACTATGGTAGCATCCATATATCTCTTCAGCTTCAAACCAACGGTCCAGCTTTTCTTGGGTATA
ATCATATGCATCATGTCACTTCATATGTACTTTGCTCCTCCACAAACGCTGGTAGACTTGCCCGTCACAAACGAAGCACATCACAA
AACCTTAAAGCAAGTTATCGTAGAAGAAAAGACAGATTCTTGATTCAAGTGGATGAAATGGTTTAGTATTACAAAACAATGGACCA
TCTACCGAGATGGTCTTATTTATAATTTTACGTTTTAGTGAATGATGTTCGTCTAGCTTCACCTTCTTGGTAAATGACTACTTTTT
GAAACAATGATCTTACTATAATAGCACCTGCACCACGGTTAAATTTTACCTTTATGGTGTTATATTATCCATTTGTTTGTGAAGGT
GAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568596 Nucleotide-sugar transporter family protein [Arabidopsis thaliana] | 1599 | 1e-175 |
| XP_002870621 nucleotide-sugar transporter family protein [Arabidopsis lyrata subsp. lyrata] | 1582 | 1e-173 |
| BAB10651 CMP-sialic acid transporter-like protein [Arabidopsis thaliana] | 1518 | 3e-166 |
| XP_002304546 predicted protein [Populus trichocarpa] | 1357 | 2e-147 |
| XP_002532660 cmp-sialic acid transporter, putative [Ricinus communis] | 1355 | 3e-147 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9Y2D2 UDP-N-acetylglucosamine transporter | 356 | 8e-033 |
| Q93890 UDP-galactose/UDP-N-acetylglucosamine transporter srf-3 | 352 | 2e-032 |
| Q6YC49 UDP-N-acetylglucosamine transporter | 349 | 5e-032 |
| O77592 UDP-N-acetylglucosamine transporter | 349 | 5e-032 |
| Q8WMS0 UDP-galactose translocator | 344 | 2e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LGE9 CMP-sialic acid transporter-like protein | 1599 | 9e-176 |
| Q9FJ38 CMP-sialic acid transporter-like protein | 1518 | 2e-166 |
| B9GX67 Predicted protein | 1357 | 1e-147 |
| B9T341 Cmp-sialic acid transporter, putative | 1355 | 2e-147 |
| B9GL89 Predicted protein | 1344 | 4e-146 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G41760.1 nucleotide-sugar transporter family protein | 1608 | 5e-179 |
| AT5G41760.2 nucleotide-sugar transporter family protein | 1608 | 5e-179 |
| AT4G35335.1 nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporter | 532 | 3e-054 |
| AT2G43240.1 nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporter | 387 | 2e-037 |
| AT3G59360.1 UTR6 (UDP-GALACTOSE TRANSPORTER 6); nucleotide-sugar transmembrane transporter/ sugar:hydrogen symporter | 387 | 2e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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