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Information for unigene UN44436
| FASTA Sequence |
| Unigene ID: UN44436 | Length: 967 |
SSR | | GGAAGAGAAGGAATCCTATTCGGAGAGAAATGAACTAAACCCTAATTCGGACAGCAGAAATTAAAAACAAACAATGAAAGCTGCTG
TCTTTCCCTCTAAAATCGCAAATCTAGGCCTCCTCCCTTCTGGCCGTTGCTGCACACTGTTCTTCCGGTCACCGGCATTGTCTTCC
GCGATATCTACAACTCCTTGTCGGAAGCTGACAAGAGGGAGACGAGGTAGTAGTCAAGGATTGATGTCTCAGTCTTCGTCGTCATC
TTCTCAATTGTTTTCGTCTCTATCGAATTCATTCTCCTCTCAGTCGGAATCGGAGTTACCTCAGGGATATCCATGAACACTGTTAA
CTTCAAGGCCTTGTTTGGCAAAGGCGTTATTGGAAACATACCGATTATGCTGGCGAAACCTCAGACTTTCATGAACGCCAGTGGTG
AGTCTGTTGGACAAATTGTTTCCTTTTACAAGATCCCGCTAAAGCAAGTACTTGTGATTTACGATGATTTAGACTTGTCCTTTGGT
AAACTGCGTTTATTGCCAAAAGGTGGCCACGGAGGGCACAATGGGATGAGAAGCATTATAGACCGGCTAAAAGGGAGCCGTGATTT
TCCCCGTCTAAGAATAGGGATTGGACGGCCTCCAGGGAAGATGGATACAGCCAATTATGTTCTTCGCCAGTTTAATAAACAAGAAC
AAGAAGAGTTGGATTATACATTTCAAACAGGGTTAGAGGCAATAAGGATCATGTTGCTTGAAGGGTTCAACAAAAGTGCAACCTTT
GTCAACACTCAGAAATCTATGCAACAACTCAGTTGAGAAAAAGAGAGAGAGAGAGAGATTGTCAAGAACTGCAGATTTTTCAGGCC
GATTCATTTATTAGAAAATCAATTCATATATCCTTTGAGCAAATTTGTATATCACAAGAAAACCAAAAGTTTATAAGCCTCGATAT
AATTTGCTCTTGATTTTAAAC
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| GenBank top hits (Blast detail) | Score | e value |
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| AAW81735 Putative Putative Pepidyl-tRNA hydrolase family protein [Brassica oleracea] | 823 | 9e-086 |
| NP_173279 Peptidyl-tRNA hydrolase [Arabidopsis thaliana] | 795 | 2e-082 |
| BAC43630 unknown protein [Arabidopsis thaliana] | 790 | 6e-082 |
| XP_002890275 peptidyl-tRNA hydrolase family protein [Arabidopsis lyrata subsp. lyrata] | 790 | 6e-082 |
| XP_002511963 peptidyl-tRNA hydrolase, putative [Ricinus communis] | 703 | 7e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8GW64 Peptidyl-tRNA hydrolase, chloroplastic | 795 | 7e-084 |
| Q5N9Q7 Peptidyl-tRNA hydrolase, mitochondrial | 652 | 3e-067 |
| Q6NLS8 Peptidyl-tRNA hydrolase, mitochondrial | 431 | 1e-041 |
| Q9M5P4 Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic | 427 | 3e-041 |
| Q9LF14 Chloroplastic group IIB intron splicing facilitator CRS2-B, chloroplastic | 424 | 7e-041 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q5FAM1 Putative Putative Pepidyl-tRNA hydrolase family protein | 823 | 6e-086 |
| B9RE24 Peptidyl-tRNA hydrolase, putative | 703 | 5e-072 |
| B9I2R3 Predicted protein | 686 | 5e-070 |
| B8A808 Putative uncharacterized protein | 656 | 1e-066 |
| B7EPP3 Putative uncharacterized protein | 652 | 4e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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