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Information for unigene UN44448

FASTA Sequence
Unigene ID: UN44448Length: 1505 SSR 
CTTTTTAATATGTCAATCTCGTTTATAAAATTAAGTAGCCTCCCTCTGTATCTTCTTCTTATTGTGATTGATGATGATGATGATGA
TGGGAAAAAAACGTAGATTGATGATGATGATGGAAGAAGGGCTGCCCCACGACGTGGTAGAGCACATCATGGAGAGACTTCCGGTG
AGATCTCTGCTGAGATTCAAGTGTGTATCAAAGCAATGGAAATCAACGATCGAATCACGAAACTTCCAAGAGAGGCAGTTGAAGCA
TGAGGAGTCAGGAGGAAGAGATCCGGATGTTCTCATGGCGACGGAAAGTAGTCAAAGAAGATATGTACTGGGTTCGTCCTCATCGG
TCAAAATCCCTAATCCTTGGGGTAAGGAGAACCCAACAACAGGCTACTTTGTGTCCGATAATAGCTGTGACGGTCTCGTTTGCCTC
TACCATCCCTTGGAATCCGGTTATGTCTTCAACCCCGCCACGAGATGGTATCGACCTCTCCCTCTCTGCCAATTGCAACAAGTCAG
GATCAGCCAAGGAGAGAGTTACTTTGAGCTTGGGCACGGCCTCTTTAAGCTTGGATTCGGCAAAGACAAGATAACATCTACTTACA
AGCCTGTTTGGCTATACAACTCTTCAGAAATAGGCCTTGACAACGCTACCACATGCGAAGTTTTCGACTTTGGCGCCAATGCTTGG
AGGTATGTCACTCCCTCTGCTCCTTATCGGGTTGTTGGGGTCGCCGATCCCGTCTTTGTACACGGTTCGCTTCATTGGCTCACAGA
TTGCGTGGAAACCAAGGTTGTATCTTTTGATCTTCACACGGAGGCTTTTCAAGTCGTCTCTTCTAAAACTCCCTTTCCCGCCAATT
CACATGATGAGAATCCTTACTCGATCATCTTGTGCAACCTCGACAACCGTCTGTGCGTGTCACACATGAAGTGGCCCGACCAAGTC
ATATGGTCCTTCAATTCAGGCAACAAGACTTGGGAAAAACTTTACTCCATCGATCTGGTTATGAATTCTTGTTGTTTTGATTGCTC
AACAATATGCGCCTTCCGTCCACTACTACTTGTGGATGGAGGAAAGAAGAAGAAGAAGAAGAATTTGCTCTTTTATGACACTGTAT
CAAGTCCATATCTGTTGATACATGACCCCGAAATCCAGCCAGACTTATTTACTTTCAGGTGTGCTCAAGTCATGAGATTTCTTGTT
TGTTATTTCCAGAGTTTAATCTCTATTTGATTTCTTTTTTTTTTCCAAAATTAACTTTGGGTTTTGTCTCTCCAGGCTGACTTCTT
TTGTTTCCAGGTTTCTTGTTCTTGTTAGCTTTCTTCTTTTGTGTTTTGGTTGTTCAAAGTTAGATACCCTTCTTCTCATGCGACAC
CAACAATACTTCTTAGTAAACAGTCTCATGCATGCCTTGTATAAATATGTTTGTGTCGGTTCACACTTTCAATTGTTTGTATCAAC
AACATAGGCATTCTACTTGAATAGATAGTTACATGTTTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172436 F-box/LRR and kelch-repeat containing protein [Arabidopsis thaliana]11206e-120
XP_002877486 predicted protein [Arabidopsis lyrata subsp. lyrata]11206e-120
CAA16923 putative protein [Arabidopsis thaliana]8402e-087
XP_002881328 predicted protein [Arabidopsis lyrata subsp. lyrata]7514e-077
XP_002889905 predicted protein [Arabidopsis lyrata subsp. lyrata]7318e-075

Swiss-Prot top hits (Blast detail)Scoree value
O04488 F-box/LRR-repeat/kelch-repeat protein At1g0965011203e-121
Q9LX89 F-box protein At5g103408173e-086
Q7X7A9 F-box protein At1g112706623e-068
Q9LPW2 Putative F-box/kelch-repeat protein At1g128704715e-046
O80777 F-box protein At2g342804402e-042

TrEMBL top hits (Blast detail)Scoree value
O49464 Putative uncharacterized protein AT4g194608401e-087
Q9M121 Putative uncharacterized protein AT4g016406081e-060
Q9ZSI2 T15B16.15 protein5972e-059
Q9LE79 F5O11.244458e-042
A0MDV8 Putative uncharacterized protein (Fragment)3516e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G09650.1 F-box family protein11202e-122
AT1G14430.1 glyoxal oxidase-related6902e-072
AT5G10340.1 F-box protein-related / SLF-related6703e-070
AT1G11270.1 F-box family protein6623e-069
AT1G11270.2 F-box family protein6623e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  33%
 
183  50%
 
201  17%

Unigene MembersMember information