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Information for unigene UN44450
| FASTA Sequence |
| Unigene ID: UN44450 | Length: 894 |
SSR | | GGATCTCGATCGGTAATTAGTGATTAGGGGTCGCTGCTTATCTGGGAAATTTCCGAATCTCCGCCGTTTTGGTTCGATTCGGATTC
TGCGGTCTTTAGTCTCAGTCTTTGGTTTTTGTTTTTTCTTTACTCAGAACCTTAAAAAACCCTAATTTTGATACATTAGCTTTAGA
ACGTTCTCTCGAGAGGTCATTCCATTAGGACATTAAAGGTTAGTCTGTGTGTTGAAGATGCCACCAAAGCAACAACCGAAGGCCGA
TTTGGCGAAAAAGCAGAAGCAAGTTGAAGAGTCACAAAAGATGCCAGTTGAAGAAGAAATCGAGAACGAGCGTGCGAAACTGAAAA
CGGCAACACAAATGACACCGGCGCTATTTATGGAATGGAAGAGGAAGAAAATAGCAGAGAGAGATGCAGGTTTGGCTGCTTCTCAA
GCCGAGAGAGCTAAGAACGACCGTATGAGTGGTCTGGAGCTATTTCTGTCGAATGCAAGCTTGTTTGTGGATGATGCTGAGGCTTT
TGAAGAGTACCAGAGGGAAAAGGAAGAGGAAGAGACTGAACAGAAGGCAAAGGAGAAAGAAACAGAGGCCCCTGGGACAAGCAGGA
GCAGTGGTGATGCTGAACAGAGTTCAAAAGAAGTGGATGAAGACGACGAAGATGATGATGATGATGATTTGGATATGGGATGAGCT
TGATGAATTGGAAGCAAGCTTGTTGAAAACATCCATCCAGATTCGTGAGCCAAACGATTAAGGATCATCATATCATATTGAGGTGA
AAATATGTGTGACAGAGAGGTGGAGGAGAGGAAAAAGCACATGTTTTACTCGCTTTTGTGTACTTTTTGATGAATTGGATTTCGCA
GACACTTGACACCTATTTTCAGGTGTTTGAATAA
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002883934 zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp. lyrata] | 567 | 4e-056 |
| NP_179618 zinc finger CCCH domain-containing protein 21 [Arabidopsis thaliana] | 560 | 2e-055 |
| XP_002525195 zinc finger protein, putative [Ricinus communis] | 407 | 1e-037 |
| XP_002326328 predicted protein [Populus trichocarpa] | 398 | 1e-036 |
| XP_002312050 predicted protein [Populus trichocarpa] | 385 | 5e-035 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SK74 Zinc finger CCCH domain-containing protein 21 | 560 | 1e-056 |
| Q0JHZ2 Zinc finger CCCH domain-containing protein 11 | 373 | 5e-035 |
| Q54DA5 Zinc finger CCCH domain-containing protein 15 homolog | 214 | 1e-016 |
| P25976 Nucleolar transcription factor 1 | 127 | 2e-006 |
| P13816 Glutamic acid-rich protein | 124 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SGS6 Zinc finger protein, putative | 407 | 9e-038 |
| B9MT73 Predicted protein | 398 | 1e-036 |
| B9HM02 Predicted protein | 385 | 3e-035 |
| B8ABP6 Putative uncharacterized protein | 375 | 5e-034 |
| B9EUB4 Putative uncharacterized protein | 373 | 8e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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