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Information for unigene UN44464
| FASTA Sequence |
| Unigene ID: UN44464 | Length: 731 |
SSR | | GATCTCCAAGAAAGACTTATACACATCTTCACTGTGCTGGAACCGTCTCTGCAGTGATAAACAACGACACTGATACAATGAGACAC
TTGAAAAGAAAAACATTGTACGAGAAACATTTTTGCGTACCTTAATTTTATTTACAAAAGAGATGGCTTCTCCAAATTCAACAGTT
TTTTTTAGGTGGGGCTTCTTCTTCTTCTTCTTCAACTACTTCATCAAGAGTTATTTCACAACCCTTAGGCAGAAAAGTGTTAAACC
CGAAAATCAAATTGTTATGCCCCTTAAACAGCTCCTTGACTCGTGCAATCACACCAGATGTATCGGTCCTGTAAATTGCAACAAGA
AAGAAGAAGAATGTTTCCAGATGCTAAAAAGAAAAGAATCAGTGTGATAATAGGAAAGCAAAAAGGTAATATTATTACCTATGAGC
CTTGAAGTCTTTCATAACCGAAAGGAACATATCATATTTGTCCATCTGATCTTGAAACATCTGTTTAACATCCTTCAAGTAGGACA
AAGCATCATGGGTTGTCAGCTTCTGAGAGTTGATTTCCCCATCACCAACGTTCCCTCCCTCCTCCTCCTCCTCCGGTGCCACCACT
TGCAGGGATTGGAGATTGCACATATCTGCACCCAAAATAAAACTCATTTTATTAACACATAAGTGTACAACCACCTAACCCAAAGG
GACAATAAGTAGTTCCTAAATCCTCAAAGAAGAGTCTTGCATC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002873701 hypothetical protein ARALYDRAFT_488346 [Arabidopsis lyrata subsp. lyrata] | 215 | 2e-015 |
| XP_002300028 hypothetical protein POPTRDRAFT_797843 [Populus trichocarpa] | 209 | 8e-015 |
| BAC43533 putative transcriptional regulatory protein [Arabidopsis thaliana] | 208 | 1e-014 |
| CAC01821 transcriptional regulatory-like protein [Arabidopsis thaliana] | 208 | 1e-014 |
| NP_197006 paired amphipathic helix protein Sin3-like 2 [Arabidopsis thaliana] | 208 | 1e-014 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LFQ3 Paired amphipathic helix protein Sin3-like 2 | 208 | 5e-016 |
| Q9SRH9 Paired amphipathic helix protein Sin3-like 1 | 190 | 6e-014 |
| O48686 Paired amphipathic helix protein Sin3-like 3 | 160 | 2e-010 |
| O04539 Paired amphipathic helix protein Sin3-like 4 | 159 | 2e-010 |
| Q9XIE1 Paired amphipathic helix protein Sin3-like 5 | 152 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GHP8 Putative uncharacterized protein SNT903 | 209 | 6e-015 |
| B9RUH7 Putative uncharacterized protein | 201 | 5e-014 |
| B9HLV3 SIN3 component, histone deacetylase complex | 172 | 1e-010 |
| B9HU88 SIN3 component, histone deacetylase complex | 169 | 2e-010 |
| B9S2H7 Putative uncharacterized protein | 166 | 5e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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