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Information for unigene UN44471

FASTA Sequence
Unigene ID: UN44471Length: 700 SSR 
GGGTGGCTCCGCGTTGGGTAACAACTTCCCTTTGAACTCCACAAGCGCTCCAAACTCCTACGAAGATGTCTTGAGCTCACAGTTTA
GGGACAGCAGTCACTTGGCGTCATCACTTCAACAGCAGAACGAACACTTAGCAGCATGGCATCAAGGACAACAATCCAACTCGCGT
GTGGTTCCAGGAAGTGGATATTACAGCCTTCCTAGTCATCAGAATCAACAGCCTCCTGGTTTCCGTCAAGCACAACTACTGCAGCA
GGCATCTCAACAACAACAACAACAGCATTTTGGAGGACATGGCTATGGGAGTCCTTACCATTCACAATCACTAGATCATCTCCATC
ACCAACACCAACAACAACAAAACGCCATAGATGCTTCTAAACAGACCCCCCACCAACAGTTATGGCCCAACAACTACTGATCAAGA
ATCAATCAGTCAAATCCTGTCTTCATGCCTTGCTTTCTCTTTCCCCTTGCAATTGGATGATTCCGAGGTGTGGGTGTGTGTGTTTG
TGTGTGTTTTGGATTGTTGTGGTTTGTGGTAAGGTCTTATGAAGGGTTTAGGTGAGAGAGACCTTCAGTGGCTGGCTTGTTTAGAT
GCTAACCTTCTTGTATCACTAGAAACTCTGTTTTTTTCTTTTACCAATTAACTCATCAATCCTGACTTCCTTTTATTTTATAAAAC
TTTACTTTAAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870069 predicted protein [Arabidopsis lyrata subsp. lyrata]6041e-060
NP_193549 uncharacterized protein [Arabidopsis thaliana]5422e-053
CAB53656 hypothetical protein [Arabidopsis thaliana]5369e-053
NP_001056347 Os05g0566900 [Oryza sativa Japonica Group]1659e-010
EEC79711 hypothetical protein OsI_21014 [Oryza sativa Indica Group]1659e-010

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SVV7 Putative uncharacterized protein AT4g181505366e-053
B8AWS4 Putative uncharacterized protein1657e-010
Q688W7 Os05g0566900 protein1657e-010

Arabidopsis top hits (Blast detail)Scoree value
AT4G18150.1 unknown protein5428e-056
AT1G29350.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, guard cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1296 (InterPro:IPR009719); BEST Arabidopsis thaliana protein match is: kinase-related (TAIR:AT1G29370.1); Has 13611 Blast hits to 7582 proteins in 387 species: Archae - 0; Bacteria - 354; Metazoa - 5683; Fungi - 1538; Plants - 892; Viruses - 68; Other Eukaryotes - 5076 (source: NCBI BLink).2183e-018
AT1G29370.1 kinase-related1914e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information