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Information for unigene UN44473

FASTA Sequence
Unigene ID: UN44473Length: 608 SSR 
GGCAAAGCCTCGAGCTTGAAAGCAGAGCAGAAAGTTATAGTTCTCCGTTCGGTGGCTCAGTACTTGGAGCGATGTGGGTTTTCTAA
ATGCTTCAAGAAGCTTCTCTCCGAAGCTGAAATCGAGAAGAAGGAATTGAACAGTAGCTTACCGGATTAGAGGAAGTTTTTTGCGA
TTTTTTAAACAAGAGCCATGTTGAAGAATCTGGTGATGATAATGAGGATGGGAAGAAGAAAGCAGCAAGTGTAGATGAGAATGCAT
CTGTTGATCACGAAAAGGACGAGAAGAAAGATAAGAAGAAGAAGAAAAAGAATGAACCAAAATTGGAGGAGGAGAAGGTCAAGGAG
ACTGATGCTGAGATTGAAGACGAACTGAAAGAGAAAAAGAAGAAGAAGAAGAAAACCAAGTCTGAGTCTTTGGTTGAAGATGAGGA
TAAGGAGAAATCCTCCAAGAAAAGGAAAAGATCAGAGCCTGAAGAGACAAAAGAAGAGACCGAGGAAGAGGATGATGAGGGATCAA
AACGGAGGAAGAAGGAAGAGAATGAAGTGGAAGAAACGCCTGTTAAGCAGCAGGCTGATGATGTTCAGGAAAACGGTAACGTTGAG
AAAAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]3502e-031
NP_200522 uncharacterized protein [Arabidopsis thaliana]3233e-028
AAM61154 unknown [Arabidopsis thaliana]3233e-028
XP_001197893 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]2257e-017
XP_001185218 PREDICTED: similar to Syne-1B [Strongylocentrotus purpuratus]2257e-017

Swiss-Prot top hits (Blast detail)Scoree value
Q55FI4 Nucleolar protein 582041e-015
P36044 Protein MNN41887e-014
P54696 Myosin-H heavy chain1887e-014
A5E4P1 Protein PXR11861e-013
Q869E1 DNA ligase 11824e-013

TrEMBL top hits (Blast detail)Scoree value
Q8LFX8 Putative uncharacterized protein3232e-028
Q9LU74 AT5g57120/MUL3_63232e-028
Q93WC7 AT5g57120/MUL3_62363e-018
C3YUI6 Putative uncharacterized protein2221e-016
C3YUC1 Putative uncharacterized protein2212e-016

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).3232e-030
AT3G28770.1 unknown protein1842e-014
AT4G37820.1 unknown protein1806e-014
AT1G56660.1 unknown protein1798e-014
AT5G65900.1 DEAD/DEAH box helicase, putative1681e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information