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Information for unigene UN44500

FASTA Sequence
Unigene ID: UN44500Length: 890 SSR 
GGAAAAATAGAAAGAAAGAAAAAAGAAACTAGAAAATAAGCACTGAAGCGAATTGATATCAGAAATTACAGTATTTGGTTTGATTA
AAGAATGTCGAACCATTCAGCTCCATTGATATCTAGGGAGCAGTTAGATCCCATGGATCAAGACTTGAACCAAAACTCATTAACTT
CTTCAAGAAAAAGAAGATTACGTCGTTGTAGAAGCGCTCCTCGTGGTGATTGTATGTACAATAATGATGAAGATGTCAAAACCGAC
GAACCACCTCCTCATCGGAGTATAATCCCAATGTTCAGGGATCTAAACCCGAATCTCAGGGAAGTGATCATGTTCTTTGTTTTATA
CCTAACCATTGGTACACTCTGTTTCTACCTCGTTAGAAACCAGATATCCGGTCATAAGACCAACGGTGTGCTAGATGCCGTCTATT
TCTGTGTTGTAACAATGACAACCATTGGATATGGTGATCTTGTCCCTAGTAGTTCAACCTCAAGGCTACTTGCTTGTGCGTTTGTC
TTTTCGGGAATGGTCCTCGTGGGTCACCTTTTAAGTCGAGCAGCAGATTACTTAGTGGAGAGGCAAGAGACTTTGCTTGGTAAGGC
TTTCGATTTGCGCAAAACAGTTGGTCCAACAGAAATTCTCAAGGAAATGACCGTGCAGATGGAGAAGCTACTTGATCTTGCAGCTA
GTGCCGCCGATGCTGTGGACGATGATGATGAGAACATCCACCGTCGCGAATGATTTTAAAGCAGTGATCCGGTTTCGTTTTTTTGT
GTTCACAATACAAAATATAATAAATAAATGAATACATATACACACACACACAAAATGTGGTGTGATAAACTAGTAATTAAGTTTCT
GAAATATTTGCAAACTAATGTTGTCAATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864404 outward rectifying potassium channel KCO1 [Arabidopsis lyrata subsp. lyrata]7431e-076
NP_200374 calcium-activated outward-rectifying potassium channel 1 [Arabidopsis thaliana]7252e-074
CAA65988 outward rectifying potassium channel KCO1 [Arabidopsis thaliana]7252e-074
AAM64705 outward rectifying potassium channel KCO [Arabidopsis thaliana]7252e-074
CAA12225 K+ channel protein [Solanum tuberosum]4671e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBL1 Calcium-activated outward-rectifying potassium channel 17258e-076
Q9S6Z8 Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic2266e-018
Q9FWX6 Putative outward-rectifying potassium channel 41962e-014
Q9SVV6 Probable calcium-activated outward-rectifying potassium channel 61891e-013
Q9FL25 Probable calcium-activated outward-rectifying potassium channel 21862e-013

TrEMBL top hits (Blast detail)Scoree value
Q0WNY4 Outward rectifying potassium channel KCO7251e-074
Q9AR58 K+ channel protein4671e-044
Q9ZP53 K+ channel protein4671e-044
Q9LLM5 Outward-rectifying potassium channel KCO14598e-044
A7BK76 Potassium channel4525e-043

Arabidopsis top hits (Blast detail)Scoree value
AT5G55630.1 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel7257e-077
AT5G55630.2 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel7257e-077
AT4G01840.1 KCO5 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5); outward rectifier potassium channel2265e-019
AT1G02510.1 TPK4; outward rectifier potassium channel1962e-015
AT4G18160.1 KCO6; outward rectifier potassium channel1891e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information