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Information for unigene UN44504
| FASTA Sequence |
| Unigene ID: UN44504 | Length: 611 |
SSR | | GGGTCTCAAATCCGTGGAGGACCACCTCGTCGGAAAAACCTACATCTCCGGAGATCAATTGTCGGTAGATGATGTGAAGGTATACG
CTGCCGTTGTTGAGAAACCAAGCGAGAGTTTCCCCAATGCTAGCAAGTGGTACGACTGTGTTGCCTCCCACCTTGCTAAAAGTTTC
CCTGGTAAAGCCGTAGGAGTTTCAATCGGTGGCTCTGCTGCTGCTCCTGCCCAAGCTGAGGCACATGCAGTAGCTGCAGCTGATGA
TGATGATGACATGGATCTGTTTGGTGACGAGACTGAGGAGGAAAAGAAAGCTGCAGAGGAGAGGGAGGCTGCTAAGAAGGACACCA
AGAAGCCCAAAGAGAGTGGAAAGTCATCCGTGCTCATGGAAGTGAAACCATGGGATGACGAGACAGATACGAAGAAACTTGAGGAG
TGTGTTCGCATTCAACAAGATCTAGAGACTCTAGATCTCTCCTTGCCAAAAAGATATTTGATTTCCTTCCAAGTTTTTGTTTCTTT
GTGTTGTTTGCTTTGGGATGTTTATTTTCTAGTTGCAAGACCTCTTACATCTGCAATGAAACAGAAACTATCAATGCCTTAGTATT
CCTTTACCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873951 elongation factor 1B alpha-subunit 2 [Arabidopsis lyrata subsp. lyrata] | 650 | 4e-066 |
| NP_568375 Elongation factor 1-beta 2 [Arabidopsis thaliana] | 625 | 3e-063 |
| NP_196772 Elongation factor 1-beta 1 [Arabidopsis thaliana] | 591 | 3e-059 |
| XP_002871512 hypothetical protein ARALYDRAFT_909184 [Arabidopsis lyrata subsp. lyrata] | 581 | 4e-058 |
| AAO22799 putative elongation factor 1B alpha-subunit [Arabidopsis thaliana] | 569 | 1e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SCX3 Elongation factor 1-beta 2 | 625 | 2e-064 |
| Q84WM9 Elongation factor 1-beta 1 | 591 | 1e-060 |
| P29545 Elongation factor 1-beta | 489 | 9e-049 |
| P29546 Elongation factor 1-beta | 472 | 9e-047 |
| P93447 Elongation factor 1-delta | 366 | 2e-034 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29PY2 At5g12110 | 591 | 2e-059 |
| B9SB41 Elongation factor 1-beta, putative | 562 | 4e-056 |
| C6T1K9 Putative uncharacterized protein | 529 | 3e-052 |
| A9P7W8 Predicted protein | 527 | 5e-052 |
| C6T034 Putative uncharacterized protein | 520 | 3e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G19510.1 elongation factor 1B alpha-subunit 2 (eEF1Balpha2) | 625 | 2e-065 |
| AT5G12110.1 elongation factor 1B alpha-subunit 1 (eEF1Balpha1) | 591 | 1e-061 |
| AT2G18110.1 elongation factor 1-beta, putative / EF-1-beta, putative | 263 | 1e-023 |
| AT1G30230.1 elongation factor 1-beta / EF-1-beta | 259 | 4e-023 |
| AT1G30230.2 elongation factor 1-beta / EF-1-beta | 259 | 4e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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